RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FAM96AQ9H5X1 160 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 SLC9A2Q9UBY0 812 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 CHI3L1P36222 383 aaPredicted RBP12.97□□□□□ -0.33
SMU1-201ENST00000397149 COG2Q14746 738 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 SPATA2LQ8IUW3 424 aaPredicted RBP12.97□□□□□ -0.33
SMU1-201ENST00000397149 TMEM35BQ8NCS4 154 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 NACC2Q96BF6 587 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 MRPL1Q9BYD6 325 aaKnown RBP12.97□□□□□ -0.33
SMU1-201ENST00000397149 COQ6Q9Y2Z9 468 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 SLC30A1Q9Y6M5 507 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 ATP5HO75947 161 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 GPC1P35052 558 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 PRIM2P49643 509 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 C1orf54Q8WWF1 131 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 BHMT2Q9H2M3 363 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 APPL1Q9UKG1 709 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.97□□□□□ -0.33
SMU1-201ENST00000397149 SMNDC1O75940 238 aaKnown RBP eCLIP12.97□□□□□ -0.33
SMU1-201ENST00000397149 MAPK9P45984 424 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 KCNJ6P48051 423 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 VSNL1P62760 191 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 SPACA7Q96KW9 195 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 NESP48681 1621 aa12.97□□□□□ -0.33
SMU1-201ENST00000397149 GTF2E2P29084 291 aaKnown RBP12.96□□□□□ -0.33
SMU1-201ENST00000397149 ZNF445P59923 1031 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
SMU1-201ENST00000397149 TAF8Q7Z7C8 310 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 DPP10Q8N608 796 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 C2orf69Q8N8R5 385 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 SEPT5Q99719 369 aaPredicted RBP12.96□□□□□ -0.33
SMU1-201ENST00000397149 ROGDIQ9GZN7 287 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 SLC25A13Q9UJS0 675 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 PODXLO00592 558 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 SLC16A4O15374 487 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 KCNN4O15554 427 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 TPST1O60507 370 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 ATP6V1B1P15313 513 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 C4BPBP20851 252 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 SULT1E1P49888 294 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 CDH6P55285 790 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 DGKKQ5KSL6 1271 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 WDR36Q8NI36 951 aaKnown RBP12.96□□□□□ -0.33
SMU1-201ENST00000397149 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
SMU1-201ENST00000397149 NPHS2Q9NP85 383 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 LRRIQ3A6PVS8 624 aaPredicted RBP12.96□□□□□ -0.33
SMU1-201ENST00000397149 CHUKO15111 745 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 ACTR2P61160 394 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 TAF5Q15542 800 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 NBPF9Q3BBW0 867 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 DPCR1Q3MIW9 517 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 ZRANB3Q5FWF4 1079 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 AP3B1O00203 1094 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 AP3B2Q13367 1082 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
SMU1-201ENST00000397149 UBTFL6P0CB48 400 aaPredicted RBP12.96□□□□□ -0.34
SMU1-201ENST00000397149 TPI1P60174 286 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 CCSAPQ6IQ19 270 aaPredicted RBP12.96□□□□□ -0.34
SMU1-201ENST00000397149 GLMNQ92990 594 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 TRIM43BA6NCK2 446 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 KRT6AP02538 564 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 KRT6BP04259 564 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 ENO2P09104 434 aaPredicted RBP12.96□□□□□ -0.34
SMU1-201ENST00000397149 GNA15P30679 374 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 PHKA2P46019 1235 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 KRT6CP48668 564 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 GPATCH4Q5T3I0 446 aaKnown RBP12.96□□□□□ -0.34
SMU1-201ENST00000397149 TYW3Q6IPR3 259 aaKnown RBP12.96□□□□□ -0.34
SMU1-201ENST00000397149 OTOAQ7RTW8 1153 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 ASAP3Q8TDY4 903 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 ERLEC1Q96DZ1 483 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 KIF12Q96FN5 646 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 SHCBP1LQ9BZQ2 653 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 ARHGEF38Q9NXL2 777 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 PCDHB8Q9UN66 801 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 POLR1DQ9Y2S0 133 aa12.96□□□□□ -0.34
SMU1-201ENST00000397149 TMA7Q9Y2S6 64 aaKnown RBP12.96□□□□□ -0.34
SMU1-201ENST00000397149 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.34
SMU1-201ENST00000397149 NSD2O96028 1365 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 ZNF804BA4D1E1 1349 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 ZBTB39O15060 712 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 SRP72O76094 671 aaKnown RBP12.95□□□□□ -0.34
SMU1-201ENST00000397149 MTM1Q13496 603 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 GSTA3Q16772 222 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 C19orf60Q96EN9 201 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 WNK4Q96J92 1243 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 TASP1Q9H6P5 420 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMU1-201ENST00000397149 TADA2AO75478 443 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 NDUFA10O95299 355 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 LONP2Q86WA8 852 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 RAVER2Q9HCJ3 691 aaKnown RBP12.95□□□□□ -0.34
SMU1-201ENST00000397149 TRIM39Q9HCM9 518 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 SCRN1Q12765 414 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 USP10Q14694 798 aaKnown RBP12.95□□□□□ -0.34
SMU1-201ENST00000397149 TTC13Q8NBP0 860 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 C2CD2LO14523 706 aa12.95□□□□□ -0.34
SMU1-201ENST00000397149 MAPKAPK2P49137 400 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms