RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.71■□□□□ 0.91
MCF2L-207ENST00000397024 SF3B1O75533 1304 aaKnown RBP eCLIP20.71■□□□□ 0.91
MCF2L-207ENST00000397024 SLC16A4O15374 487 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 ADAM12O43184 909 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 GUCY2CP25092 1073 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 OSTNP61366 133 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 NHLH1Q02575 133 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 DMP1Q13316 513 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-207ENST00000397024 ALKAL1Q6UXT8 129 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 CEP57Q86XR8 500 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 SYT2Q8N9I0 419 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-207ENST00000397024 PRSS33Q8NF86 280 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 HDAC7Q8WUI4 952 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 ZBTB45Q96K62 511 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-207ENST00000397024 DRC1Q96MC2 740 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 CLSTN3Q9BQT9 956 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 NTPCRQ9BSD7 190 aaKnown RBP20.7■□□□□ 0.9
MCF2L-207ENST00000397024 TTPALQ9BTX7 342 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 DOCK6Q96HP0 2047 aa20.7■□□□□ 0.9
MCF2L-207ENST00000397024 NPHP3-ACAD11A0A0J9YXS1 232 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 SMIM28A0A1B0GU29 152 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 ABLIM1O14639 778 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 MEFVO15553 781 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-207ENST00000397024 PAPLNO95428 1278 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 GRM5P41594 1212 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 SLC12A3P55017 1021 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 SOX4Q06945 474 aaPredicted RBP20.69■□□□□ 0.9
MCF2L-207ENST00000397024 MTMR3Q13615 1198 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 ARSHQ5FYA8 562 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 ARL6IP4Q66PJ3 421 aaKnown RBP20.69■□□□□ 0.9
MCF2L-207ENST00000397024 OTOP3Q7RTS5 596 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 SUGP1Q8IWZ8 645 aaKnown RBP20.69■□□□□ 0.9
MCF2L-207ENST00000397024 UBALD2Q8IYN6 164 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 LRRC15Q8TF66 581 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 PIK3R5Q8WYR1 880 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 MRPL4Q9BYD3 311 aaKnown RBP20.69■□□□□ 0.9
MCF2L-207ENST00000397024 NT5C3AQ9H0P0 336 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 PLEKHA4Q9H4M7 779 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 GOLGA2P5Q9HBQ8 144 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
MCF2L-207ENST00000397024 RBM19Q9Y4C8 960 aaKnown RBP20.69■□□□□ 0.9
MCF2L-207ENST00000397024 PHLPP2Q6ZVD8 1323 aa20.69■□□□□ 0.9
MCF2L-207ENST00000397024 VWA8A3KMH1 1905 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 C1RP00736 705 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 PLA2G4BP0C869 781 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 PROZP22891 400 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 CLCNKBP51801 687 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 ZNF568Q3ZCX4 644 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 TMEM119Q4V9L6 283 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 XKR4Q5GH76 650 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 SMG7Q92540 1137 aaKnown RBP20.68■□□□□ 0.9
MCF2L-207ENST00000397024 ACSF2Q96CM8 615 aaPredicted RBP20.68■□□□□ 0.9
MCF2L-207ENST00000397024 RHOBTB2Q9BYZ6 727 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 C17orf75Q9HAS0 396 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 DPP7Q9UHL4 492 aa20.68■□□□□ 0.9
MCF2L-207ENST00000397024 KMT2EQ8IZD2 1858 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 AVPR2P30518 371 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 CACNB1Q02641 598 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-207ENST00000397024 GRIN1Q05586 938 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 PSMD5Q16401 504 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 DCLRE1AQ6PJP8 1040 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 CYP26C1Q6V0L0 522 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 C3orf58Q8NDZ4 430 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 TMEM161BQ8NDZ6 487 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 SPIRE2Q8WWL2 714 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 ZMAT2Q96NC0 199 aaKnown RBP20.67■□□□□ 0.9
MCF2L-207ENST00000397024 MYADMQ96S97 322 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 TIPINQ9BVW5 301 aa20.67■□□□□ 0.9
MCF2L-207ENST00000397024 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.67■□□□□ 0.9
MCF2L-207ENST00000397024 I3L4J1 428 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 B3GAT3O94766 335 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 PLS3P13797 630 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 FGFR3P22607 806 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 CUL4AQ13619 759 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 UPP1Q16831 310 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 ELMSAN1Q6PJG2 1045 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 RSPO2Q6UXX9 243 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-207ENST00000397024 APBB1IPQ7Z5R6 666 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-207ENST00000397024 ALYREFQ86V81 257 aaKnown RBP20.66■□□□□ 0.9
MCF2L-207ENST00000397024 TCHPQ9BT92 498 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 CCDC94Q9BW85 323 aaPredicted RBP20.66■□□□□ 0.9
MCF2L-207ENST00000397024 PRKD2Q9BZL6 878 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 KCNK12Q9HB15 430 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 CLUHO75153 1309 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 MYH11P35749 1972 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 DOCK8Q8NF50 2099 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 CACNA1HO95180 2353 aa20.66■□□□□ 0.9
MCF2L-207ENST00000397024 TMEM189-UBE2V1I3L0A0 370 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 ZMYND10O75800 440 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 MAPTP10636 758 aaKnown RBP20.65■□□□□ 0.9
MCF2L-207ENST00000397024 MCF2P10911 925 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 BRCC3P46736 316 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 CREMQ03060 361 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 TCF15Q12870 199 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 SEZ6Q53EL9 994 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 MPZL3Q6UWV2 235 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 KCTD17Q8N5Z5 321 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 RSAD2Q8WXG1 361 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 CDK5RAP3Q96JB5 506 aa20.65■□□□□ 0.9
MCF2L-207ENST00000397024 ZDHHC7Q9NXF8 308 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms