RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 MRGBPQ9NV56 204 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 CNTRLQ7Z7A1 2325 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 CASZ1Q86V15 1759 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 TCP10L2B9ZVM9 353 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 MARK3P27448 753 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 ACCSLQ4AC99 568 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 SLFN13Q68D06 897 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF786Q8N393 782 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 SNX31Q8N9S9 440 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 IL1RAPL1Q9NZN1 696 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 KRT76Q01546 638 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 GPATCH4Q5T3I0 446 aaKnown RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 CDHR1Q96JP9 859 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 IL6P05231 212 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 PLA2G4AP47712 749 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 TBCKQ8TEA7 893 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 ACAP3Q96P50 834 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 HOXB7P09629 217 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 MYBL1P10243 752 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 GPC5P78333 572 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 NME3Q13232 169 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 TRIQKQ629K1 86 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 FAM45AQ8TCE6 357 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 PGBD4Q96DM1 585 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 YIPF2Q9BWQ6 316 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 CNOT8Q9UFF9 292 aaKnown RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 HSMCR30P0CW71 290 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 KIZQ2M2Z5 673 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 TRPM8Q7Z2W7 1104 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 OR6B3Q8NGW1 331 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 RASGRP4Q8TDF6 673 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 RNF26Q9BY78 433 aaPredicted RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 HDAC6Q9UBN7 1215 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.86□□□□□ -0.67
COL4A4-201ENST00000396625 USP19O94966 1318 aa10.86□□□□□ -0.67
COL4A4-201ENST00000396625 OSBPP22059 807 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 ALDH6A1Q02252 535 aaKnown RBP10.85□□□□□ -0.67
COL4A4-201ENST00000396625 PUDPQ08623 228 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 AKIRIN2Q53H80 203 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 PAGE5Q96GU1 130 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 IP6K2Q9UHH9 426 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 CCDC88CQ9P219 2028 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 SNTNA6NMZ2 147 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 FEN1P39748 380 aaKnown RBP10.85□□□□□ -0.67
COL4A4-201ENST00000396625 NNMTP40261 264 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 NUP107P57740 925 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 PRUNE1Q86TP1 453 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 DPP10Q8N608 796 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 A0A1W2PP64 1363 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 FGAP02671 866 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 MMP1P03956 469 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 CCNA1P78396 465 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 KLHL12Q53G59 568 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF667Q5HYK9 610 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 ARMC3Q5W041 872 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 KRT78Q8N1N4 520 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 WNK4Q96J92 1243 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 ERAP1Q9NZ08 941 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 FAM153AQ9UHL3 310 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 LAMC1P11047 1609 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 SMIM31A0A1B0GVY4 71 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF197O14709 1029 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 GGPS1O95749 300 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 SOAT1P35610 550 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 KCNQ4P56696 695 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 ALFQ53S48 1182 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 LRRC8DQ7L1W4 858 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 P3H2Q8IVL5 708 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 HES6Q96HZ4 224 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 GTF2A1LQ9UNN4 478 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 SMG5Q9UPR3 1016 aaKnown RBP10.85□□□□□ -0.67
COL4A4-201ENST00000396625 STX7O15400 261 aaKnown RBP10.85□□□□□ -0.67
COL4A4-201ENST00000396625 VSNL1P62760 191 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 IKBIPQ70UQ0 350 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 BNIPLQ7Z465 357 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 MDM1Q8TC05 714 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 ARID1BQ8NFD5 2236 aaPredicted RBP10.85□□□□□ -0.67
COL4A4-201ENST00000396625 CLASP2O75122 1294 aaKnown RBP10.85□□□□□ -0.67
COL4A4-201ENST00000396625 CHN1P15882 459 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 BTDP43251 543 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 CDKL3Q8IVW4 592 aaPredicted RBP10.85□□□□□ -0.67
COL4A4-201ENST00000396625 MB21D1Q8N884 522 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 RERGLQ9H628 205 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 PSD3Q9NYI0 1048 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 TEX28O15482 410 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 TFDP2Q14188 446 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 NFIL3Q16649 462 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 EFHC2Q5JST6 749 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 KCTD17Q8N5Z5 321 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 KDM5DQ9BY66 1539 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 PITPNM2Q9BZ72 1349 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 GTF2IP78347 998 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 DSTYKQ6XUX3 929 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 IFNEQ86WN2 208 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 BFARQ9NZS9 450 aa10.85□□□□□ -0.67
COL4A4-201ENST00000396625 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 ZNF189O75820 626 aaPredicted RBP10.84□□□□□ -0.67
COL4A4-201ENST00000396625 IL12RB1P42701 662 aa10.84□□□□□ -0.67
COL4A4-201ENST00000396625 DHX34Q14147 1143 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms