RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 LRIG3Q6UXM1 1119 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ANKMY2Q8IV38 441 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 ASAP3Q8TDY4 903 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 SEC16BQ96JE7 1060 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 SLC7A5P2Q9GIP4 190 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 FAM49AQ9H0Q0 323 aaPredicted RBP14.72□□□□□ -0.05
COL4A3-202ENST00000396578 PPCSQ9HAB8 311 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 C20orf96Q9NUD7 363 aaPredicted RBP14.72□□□□□ -0.05
COL4A3-202ENST00000396578 HSPBP1Q9NZL4 362 aa14.72□□□□□ -0.05
COL4A3-202ENST00000396578 POTEMA6NI47 508 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 LARGE1O95461 756 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 IYDQ6PHW0 289 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 TRIM69Q86WT6 500 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 FAM47DPA6NHR8 397 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 KRR1Q13601 381 aaKnown RBP14.71□□□□□ -0.05
COL4A3-202ENST00000396578 PADI6Q6TGC4 694 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 PSMC3IPQ9P2W1 217 aaPredicted RBP14.71□□□□□ -0.05
COL4A3-202ENST00000396578 FAM107AO95990 144 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 USP21Q9UK80 565 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 MTO1Q9Y2Z2 717 aaKnown RBP14.71□□□□□ -0.05
COL4A3-202ENST00000396578 TSPOAP1O95153 1857 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 TRIP4Q15650 581 aaPredicted RBP14.71□□□□□ -0.05
COL4A3-202ENST00000396578 ACCSLQ4AC99 568 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 TBC1D19Q8N5T2 526 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 ZFP42Q96MM3 310 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 UNC13AQ9UPW8 1703 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 TWF2Q6IBS0 349 aaKnown RBP14.71□□□□□ -0.05
COL4A3-202ENST00000396578 DYNLL2Q96FJ2 89 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 OLFML3Q9NRN5 406 aa14.71□□□□□ -0.05
COL4A3-202ENST00000396578 KDM5CP41229 1560 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 CDH16O75309 829 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 MYL2P10916 166 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 STX3Q13277 289 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 SMAD1Q15797 465 aaKnown RBP14.71□□□□□ -0.06
COL4A3-202ENST00000396578 SLC44A4Q53GD3 710 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 C6orf10Q5SRN2 563 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 ANKRD40Q6AI12 368 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 FAM180AQ6UWF9 173 aa14.71□□□□□ -0.06
COL4A3-202ENST00000396578 APRTP07741 180 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 CRKLP46109 303 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 PFKFB3Q16875 520 aaPredicted RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 DCUN1D1Q96GG9 259 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 C17orf80Q9BSJ5 609 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 PNMA3Q9UL41 463 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 PLOD1Q02809 727 aaPredicted RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 ZNF235Q14590 738 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 NECTIN1Q15223 517 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 DIS3LQ8TF46 1054 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 RMDN1Q96DB5 314 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 MRPL4Q9BYD3 311 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 C2orf40Q9H1Z8 148 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 NFKBIL1Q9UBC1 381 aaPredicted RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 A0A1W2PQC6 194 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 PSMD3O43242 534 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 CYTH3O43739 400 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 ACTR2P61160 394 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 TP53BP2Q13625 1128 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 ZBTB5O15062 677 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 ATP9BO43861 1147 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 COPB2P35606 906 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 SOX6P35712 828 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 P3H1Q32P28 736 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 INTS2Q9H0H0 1204 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 XPO7Q9UIA9 1087 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 TTC26A0AVF1 554 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 DENND3A2RUS2 1198 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 PHF2O75151 1096 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 C4BPBP20851 252 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 HSPA13P48723 471 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 HSD17B4P51659 736 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 RCOR2Q8IZ40 523 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 ZNF341Q9BYN7 854 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 PVALEFA0A1B0GWK0 134 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 ERFP50548 548 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 PRPF39Q86UA1 669 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 APLFQ8IW19 511 aaPredicted RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 POLR1AO95602 1720 aaPredicted RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 CSTF3Q12996 717 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 TRIM71Q2Q1W2 868 aaKnown RBP14.7□□□□□ -0.06
COL4A3-202ENST00000396578 TRIM16LQ309B1 348 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 WLSQ5T9L3 541 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 SYBUQ9NX95 663 aa14.7□□□□□ -0.06
COL4A3-202ENST00000396578 CYP2D7A0A087X1C5 515 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 SRP72O76094 671 aaKnown RBP14.69□□□□□ -0.06
COL4A3-202ENST00000396578 RALBP11234 206 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 DSG1Q02413 1049 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 COBLL1Q53SF7 1204 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 FRMD5Q7Z6J6 570 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 FMR1NBQ8N0W7 255 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-202ENST00000396578 OPTNQ96CV9 577 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 MS4A14Q96JA4 679 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 TBC1D22BQ9NU19 505 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 IL6STP40189 918 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-202ENST00000396578 KPNB1Q14974 876 aaKnown RBP14.69□□□□□ -0.06
COL4A3-202ENST00000396578 PPP1R18Q6NYC8 613 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 LVRNQ6Q4G3 990 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 TMEM179Q6ZVK1 233 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 SNX12Q9UMY4 172 aa14.69□□□□□ -0.06
COL4A3-202ENST00000396578 PRG3Q9Y2Y8 225 aaPredicted RBP14.69□□□□□ -0.06
COL4A3-202ENST00000396578 DLGAP3O95886 979 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms