RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 DOCK8Q8NF50 2099 aa19.33■□□□□ 0.69
EXOSC3-202ENST00000396521 TMEM189-UBE2V1I3L0A0 370 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 ACKR2O00590 384 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 LAMTOR5O43504 91 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 USO1O60763 962 aaKnown RBP19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 KIF4AO95239 1232 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 ATP2B1P20020 1258 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 PRPF4BQ13523 1007 aaKnown RBP19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 PPP2R5AQ15172 486 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 MLF2Q15773 248 aaPredicted RBP19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 TMEM132AQ24JP5 1023 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 SLC44A4Q53GD3 710 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 POTEGQ6S5H5 508 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 CDR2LQ86X02 465 aaPredicted RBP19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 RMDN1Q96DB5 314 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 UROC1Q96N76 676 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 MTMR9Q96QG7 549 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 GJB4Q9NTQ9 266 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 GDE1Q9NZC3 331 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 TPCN1Q9ULQ1 816 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 PCDHGA2Q9Y5H1 932 aa19.33■□□□□ 0.68
EXOSC3-202ENST00000396521 CASTOR2A6NHX0 329 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 PTGESO14684 152 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 EFNA5P52803 228 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 ANAPC15P60006 121 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 SNW1Q13573 536 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 TRIM29Q14134 588 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 DCAF4L1Q3SXM0 396 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 AXDND1Q5T1B0 1012 aaPredicted RBP19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 KIAA2013Q8IYS2 634 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 SECISBP2LQ93073 1101 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 PAAF1Q9BRP4 392 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 FOXQ1Q9C009 403 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 AVENQ9NQS1 362 aaPredicted RBP19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 SNTG2Q9NY99 539 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 POLIQ9UNA4 740 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 MRPS17Q9Y2R5 130 aaKnown RBP19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 BACE2Q9Y5Z0 518 aa19.32■□□□□ 0.68
EXOSC3-202ENST00000396521 RECQL4O94761 1208 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 CTDNEP1O95476 244 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 GLULP15104 373 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 MUTP22033 750 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 FGFR3P22607 806 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 NAMPTP43490 491 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 PABPC1LQ4VXU2 614 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 ZBTB41Q5SVQ8 909 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 ANKS3Q6ZW76 656 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 SUMF1Q8NBK3 374 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 ERMNQ8TAM6 284 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 SLC7A14Q8TBB6 771 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 ATRIPQ8WXE1 791 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 RABGGTAQ92696 567 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 POLR3CQ9BUI4 534 aaPredicted RBP19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 RPP25Q9BUL9 199 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 PDZD7Q9H5P4 517 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 SPATA6Q9NWH7 488 aaPredicted RBP19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 DLL3Q9NYJ7 618 aa19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 MTCL1Q9Y4B5 1905 aaKnown RBP19.31■□□□□ 0.68
EXOSC3-202ENST00000396521 CEP250Q9BV73 2442 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 FAM170BA6NMN3 283 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 CCL16O15467 120 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 ECI2O75521 394 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 B3GAT3O94766 335 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 SPATA31C1P0DKV0 1188 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 CYP11B2P19099 503 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 OR1D2P34982 312 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 ORC2Q13416 577 aaPredicted RBP19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 NAB2Q15742 525 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 CATSPER3Q86XQ3 398 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 DEPTORQ8TB45 409 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 HASPINQ8TF76 798 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 FAM126AQ9BYI3 521 aaPredicted RBP19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 GPRC5CQ9NQ84 441 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 MTRRQ9UBK8 725 aa19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 MRPS23Q9Y3D9 190 aaKnown RBP19.3■□□□□ 0.68
EXOSC3-202ENST00000396521 TDRD15B5MCY1 1934 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 FRYLO94915 3013 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 DMXL1Q9Y485 3027 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 FAM205CA6NFA0 338 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 PRKCBP05771 671 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 FDPSP14324 419 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 RPA1P27694 616 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 RPS9P46781 194 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 UBXN2BQ14CS0 331 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 MAEAQ7L5Y9 396 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 NPAS3Q8IXF0 933 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 DIS3L2Q8IYB7 885 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 MAML2Q8IZL2 1156 aaPredicted RBP19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 CLDN23Q96B33 292 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 DDX27Q96GQ7 796 aaKnown RBP19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 IFT74Q96LB3 600 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 LTB4R2Q9NPC1 389 aa19.29■□□□□ 0.68
EXOSC3-202ENST00000396521 BTBD18B2RXH4 712 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 NTHL1P78549 312 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 VARS2Q5ST30 1063 aaKnown RBP19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 PADI6Q6TGC4 694 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 ZNF852Q6ZMS4 543 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 NOSTRINQ8IVI9 506 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 ITFG1Q8TB96 612 aa19.28■□□□□ 0.68
EXOSC3-202ENST00000396521 KIFAP3Q92845 792 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms