RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZNF653Q96CK0 615 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 NUP85Q9BW27 656 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 SPATC1LQ9H0A9 340 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 RAB17Q9H0T7 212 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 NRBP2Q9NSY0 501 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 UTP11Q9Y3A2 253 aaKnown RBP18.03■□□□□ 0.48
NUP50-202ENST00000396096 CSADQ9Y600 493 aa18.03■□□□□ 0.48
NUP50-202ENST00000396096 K7ERI5 159 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 IRF6O14896 467 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 IVLP07476 585 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 CTNNA1P35221 906 aaKnown RBP18.02■□□□□ 0.48
NUP50-202ENST00000396096 NLRP11P59045 1033 aaKnown RBP18.02■□□□□ 0.48
NUP50-202ENST00000396096 MESDQ14696 234 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 DDX42Q86XP3 938 aaKnown RBP eCLIP18.02■□□□□ 0.48
NUP50-202ENST00000396096 EFCAB13Q8IY85 973 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 KRT35Q92764 455 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 FNBP1Q96RU3 617 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 HAPLN2Q9GZV7 340 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 NEUROG2Q9H2A3 272 aa18.02■□□□□ 0.48
NUP50-202ENST00000396096 ADGRA2Q96PE1 1338 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 A0A0B4J269 797 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 A0A0G2JLL6 359 aaPredicted RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 HLA-DRAP01903 254 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 BPIFB4P59827 614 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 SKOR1P84550 965 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 ZNF211Q13398 564 aaPredicted RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 EMC10Q5UCC4 262 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 TDRD10Q5VZ19 366 aaKnown RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 FAM160B1Q5W0V3 765 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 PRRT2Q7Z6L0 340 aaPredicted RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 PI4K2AQ9BTU6 479 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 ERVK-5Q9HDB9 667 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 AVENQ9NQS1 362 aaPredicted RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 ADARB2Q9NS39 739 aaKnown RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 LRRIQ4A6NIV6 560 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 DAPK3O43293 454 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 ATMINO43313 823 aaPredicted RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 PHF2O75151 1096 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 UNGP13051 313 aaPredicted RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 MARCKSL1P49006 195 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 WNT7BP56706 349 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 DR1Q01658 176 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 DUPD1Q68J44 220 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 LRRC31Q6UY01 552 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 CGRRF1Q99675 332 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 CELF4Q9BZC1 486 aaKnown RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 CWC15Q9P013 229 aaKnown RBP18.01■□□□□ 0.47
NUP50-202ENST00000396096 PCDHB2Q9Y5E7 798 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 PCDHA3Q9Y5H8 950 aa18.01■□□□□ 0.47
NUP50-202ENST00000396096 A6NNZ2 444 aa18■□□□□ 0.47
NUP50-202ENST00000396096 TMEM110-MUSTN1A8MSY1 372 aa18■□□□□ 0.47
NUP50-202ENST00000396096 MAFO75444 373 aaPredicted RBP18■□□□□ 0.47
NUP50-202ENST00000396096 VNN1O95497 513 aa18■□□□□ 0.47
NUP50-202ENST00000396096 KRT5P13647 590 aa18■□□□□ 0.47
NUP50-202ENST00000396096 CHRNA3P32297 505 aa18■□□□□ 0.47
NUP50-202ENST00000396096 HSD17B3P37058 310 aa18■□□□□ 0.47
NUP50-202ENST00000396096 STAT5BP51692 787 aa18■□□□□ 0.47
NUP50-202ENST00000396096 DRG2P55039 364 aaKnown RBP18■□□□□ 0.47
NUP50-202ENST00000396096 MTMR3Q13615 1198 aa18■□□□□ 0.47
NUP50-202ENST00000396096 TUBB8Q3ZCM7 444 aa18■□□□□ 0.47
NUP50-202ENST00000396096 SPDYCQ5MJ68 293 aa18■□□□□ 0.47
NUP50-202ENST00000396096 SEL1L2Q5TEA6 688 aa18■□□□□ 0.47
NUP50-202ENST00000396096 NAA35Q5VZE5 725 aa18■□□□□ 0.47
NUP50-202ENST00000396096 METTL7BQ6UX53 244 aa18■□□□□ 0.47
NUP50-202ENST00000396096 ATP8B4Q8TF62 1192 aa18■□□□□ 0.47
NUP50-202ENST00000396096 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
NUP50-202ENST00000396096 PTPRJQ12913 1337 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 FAM170AA1A519 330 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 H0YGN5 161 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 ADCY3O60266 1144 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 PEX10O60683 326 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 CNMDO75829 334 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 KRT14P02533 472 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 MYBL1P10243 752 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 TNNI1P19237 187 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 ACO1P21399 889 aaKnown RBP17.99■□□□□ 0.47
NUP50-202ENST00000396096 ACOT2P49753 483 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 UAP1Q16222 522 aaPredicted RBP17.99■□□□□ 0.47
NUP50-202ENST00000396096 CYP1B1Q16678 543 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 SEPT1Q8WYJ6 367 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 TRIM11Q96F44 468 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 PKNOX2Q96KN3 472 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 FAM167AQ96KS9 214 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 ERP44Q9BS26 406 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 TARS2Q9BW92 718 aaKnown RBP17.99■□□□□ 0.47
NUP50-202ENST00000396096 RBAKQ9NYW8 714 aaPredicted RBP17.99■□□□□ 0.47
NUP50-202ENST00000396096 CNOT8Q9UFF9 292 aaKnown RBP17.99■□□□□ 0.47
NUP50-202ENST00000396096 PCYOX1Q9UHG3 505 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 PLAAQ9Y263 795 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 NFS1Q9Y697 457 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 CNTNAP2Q9UHC6 1331 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 CXCL11O14625 94 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 PIK3CAP42336 1068 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 PTGIRP43119 386 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 IREB2P48200 963 aaKnown RBP17.99■□□□□ 0.47
NUP50-202ENST00000396096 CAPSQ13938 189 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 ZPBP2Q6X784 338 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 GADL1Q6ZQY3 521 aa17.99■□□□□ 0.47
NUP50-202ENST00000396096 NCAPG2Q86XI2 1143 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms