RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 HOMER2Q9NSB8 354 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 CYP39A1Q9NYL5 469 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 RNF14Q9UBS8 474 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 RIPK3Q9Y572 518 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 PCDHB6Q9Y5E3 794 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 SRPRBQ9Y5M8 271 aaKnown RBP9.7□□□□□ -0.86
RAE1-202ENST00000395840 V9GY48 417 aaPredicted RBP9.7□□□□□ -0.86
RAE1-202ENST00000395840 DNAJC25-GNG10A0A024R161 153 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.7□□□□□ -0.86
RAE1-202ENST00000395840 BTBD18B2RXH4 712 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 GFPT2O94808 682 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 GNA14O95837 355 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 HMGCRP04035 888 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 POLR2MP0CAP2 368 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 SCG2P13521 617 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 CTGFP29279 349 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 GRK4P32298 578 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 SNAP25P60880 206 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 MTMR3Q13615 1198 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 CNPY1Q3B7I2 92 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 ZNF792Q3KQV3 632 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 SLC9C1Q4G0N8 1177 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 ZNF365Q70YC5 407 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 SH3RF1Q7Z6J0 888 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.7□□□□□ -0.86
RAE1-202ENST00000395840 PIGOQ8TEQ8 1089 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 CLEC4DQ8WXI8 215 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 UTP4Q969X6 686 aaKnown RBP9.7□□□□□ -0.86
RAE1-202ENST00000395840 BLZF1Q9H2G9 400 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 CPVLQ9H3G5 476 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 INTS9Q9NV88 658 aaKnown RBP9.7□□□□□ -0.86
RAE1-202ENST00000395840 BARHL2Q9NY43 387 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 SYNGAP1Q96PV0 1343 aa9.7□□□□□ -0.86
RAE1-202ENST00000395840 PIK3CDO00329 1044 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 E2F6O75461 281 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 SPATA31D3P0C874 917 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 GNA11P29992 359 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 NTRK3Q16288 839 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 TYW1BQ6NUM6 668 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 NSMFQ6X4W1 530 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 SPATA31D4Q6ZUB0 917 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 IRF2BP1Q8IU81 584 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 RBBP8NLQ8NC74 664 aaPredicted RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 DDX27Q96GQ7 796 aaKnown RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 RAB3IPQ96QF0 476 aaPredicted RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 NUDCD1Q96RS6 583 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 TIPINQ9BVW5 301 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 TTYH3Q9C0H2 523 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 FAM192AQ9GZU8 254 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 TUBGCP4Q9UGJ1 667 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 USP15Q9Y4E8 981 aaPredicted RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 RBBP6Q7Z6E9 1792 aaKnown RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 ESYT2A0FGR8 921 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 FOSP01100 380 aaPredicted RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 CCDC166P0CW27 439 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 GM2AP17900 193 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CYP2B6P20813 491 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 HSD17B4P51659 736 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 NLRP5P59047 1200 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CUL1Q13616 776 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 MAMDC4Q6UXC1 1216 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 HEATR3Q7Z4Q2 680 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 EXOC3L1Q86VI1 746 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CCDC82Q8N4S0 544 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 FITM2Q8N6M3 262 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 ZBTB8BQ8NAP8 495 aaPredicted RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 PCMTD1Q96MG8 357 aaPredicted RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 SLC26A6Q9BXS9 759 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 MCOLN1Q9GZU1 580 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 ADAM7Q9H2U9 754 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 ETNK1Q9HBU6 452 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 C6orf50Q9HD87 102 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CTTNBP2NLQ9P2B4 639 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 PTCH2Q9Y6C5 1203 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 TRIM49BA6NDI0 452 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 MYBP10242 640 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CALML3P27482 149 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CCNFP41002 786 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 NAPAP54920 295 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 TNNC1P63316 161 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 P3H1Q32P28 736 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 ZC2HC1CQ53FD0 456 aaPredicted RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 XRRA1Q6P2D8 792 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 GPIHBP1Q8IV16 184 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 FAM133AQ8N9E0 248 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 SMYD1Q8NB12 490 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 NSUN6Q8TEA1 469 aaKnown RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 FERMT2Q96AC1 680 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 ARMC5Q96C12 935 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 MAML3Q96JK9 1138 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 PSTPIP2Q9H939 334 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CTNNAL1Q9UBT7 734 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 PAIP2BQ9ULR5 123 aaKnown RBP9.69□□□□□ -0.86
RAE1-202ENST00000395840 GABRQQ9UN88 632 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 CHMP2BQ9UQN3 213 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 WDR37Q9Y2I8 494 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 LRCH1Q9Y2L9 728 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 USH1CQ9Y6N9 552 aa9.69□□□□□ -0.86
RAE1-202ENST00000395840 F8VZ95 297 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms