RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 ATXN8OSP0DMR3 200 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 ZNF235Q14590 738 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 PTPAQ15257 358 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 C10orf120Q5SQS8 335 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 ADAT2Q7Z6V5 191 aaKnown RBP13.68□□□□□ -0.22
CAST-206ENST00000395812 RPTORQ8N122 1335 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 TRIM49BA6NDI0 452 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 ACADSBP45954 432 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 THOC5Q13769 683 aaKnown RBP13.68□□□□□ -0.22
CAST-206ENST00000395812 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 TTC23LQ6PF05 361 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 IFT43Q96FT9 208 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 THG1LQ9NWX6 298 aaKnown RBP13.68□□□□□ -0.22
CAST-206ENST00000395812 KLHL8Q9P2G9 620 aaPredicted RBP13.68□□□□□ -0.22
CAST-206ENST00000395812 DDX20Q9UHI6 824 aaKnown RBP13.68□□□□□ -0.22
CAST-206ENST00000395812 ANAPC7Q9UJX3 599 aa13.68□□□□□ -0.22
CAST-206ENST00000395812 ZMYND8Q9ULU4 1186 aaPredicted RBP13.68□□□□□ -0.22
CAST-206ENST00000395812 SLC37A4O43826 429 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 ITGB3P05106 788 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 ATF2P15336 505 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 IFNAR2P48551 515 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 KRT31Q15323 416 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 COPS5Q92905 334 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 KIFC3Q9BVG8 833 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 SEZ6LQ9BYH1 1024 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 FBXO2Q9UK22 296 aaPredicted RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 IRF1P10914 325 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 DRAP1Q14919 205 aaPredicted RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 MAGOHBQ96A72 148 aaKnown RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 C7orf25Q9BPX7 421 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 NIF3L1Q9GZT8 377 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 FAM107BQ9H098 131 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAST-206ENST00000395812 FAM49BQ9NUQ9 324 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 AHDC1Q5TGY3 1603 aaPredicted RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 SLC16A3O15427 465 aaKnown RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 GJB1P08034 283 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 SAT1P21673 171 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 EIF4BP23588 611 aaKnown RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 SERPINB6P35237 376 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 ZC2HC1CQ53FD0 456 aaPredicted RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 SPDYE1Q8NFV5 336 aaPredicted RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 BRI3BPQ8WY22 251 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 MMTAG2Q9BU76 263 aaKnown RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 HOMER3Q9NSC5 361 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 WDR35Q9P2L0 1181 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 MYMKA6NI61 221 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 TTLL13PA6NNM8 815 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 CYB561D2O14569 222 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 MYL4P12829 197 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
CAST-206ENST00000395812 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 USP38Q8NB14 1042 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 RUNDC3BQ96NL0 473 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 ANGPTL3Q9Y5C1 460 aa13.67□□□□□ -0.22
CAST-206ENST00000395812 H3BRJ5 948 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 EIF4A3P38919 411 aaKnown RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 NPTX2P47972 431 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 PLD1Q13393 1074 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 DRP2Q13474 957 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 PPM1LQ5SGD2 360 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 TRAPPC12Q8WVT3 735 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 CEP72Q9P209 647 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 PASKQ96RG2 1323 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 CASTOR2A6NHX0 329 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 CSDE1O75534 798 aaKnown RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 HLA-DRAP01903 254 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 GARSP41250 739 aaKnown RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 YWHAHQ04917 246 aaPredicted RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 RIN2Q8WYP3 895 aaPredicted RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 SMC6Q96SB8 1091 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 DESI2Q9BSY9 194 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 MAP3K13O43283 966 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 ZRANB2O95218 330 aaKnown RBP eCLIP13.66□□□□□ -0.22
CAST-206ENST00000395812 VIMP08670 466 aaKnown RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 YWHAGP61981 247 aaKnown RBP eCLIP13.66□□□□□ -0.22
CAST-206ENST00000395812 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 CCDC170Q8IYT3 715 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 ABRAQ8N0Z2 381 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 PRIMPOLQ96LW4 560 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 PORCNQ9H237 461 aa13.66□□□□□ -0.22
CAST-206ENST00000395812 MRPL17Q9NRX2 175 aaKnown RBP13.66□□□□□ -0.22
CAST-206ENST00000395812 A0A0G2JLL6 359 aaPredicted RBP13.65□□□□□ -0.22
CAST-206ENST00000395812 KRT7P08729 469 aa13.65□□□□□ -0.22
CAST-206ENST00000395812 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
CAST-206ENST00000395812 LHX1P48742 406 aa13.65□□□□□ -0.22
CAST-206ENST00000395812 NDUFV1P49821 464 aa13.65□□□□□ -0.22
CAST-206ENST00000395812 EDRF1Q3B7T1 1238 aa13.65□□□□□ -0.22
CAST-206ENST00000395812 NAA35Q5VZE5 725 aa13.65□□□□□ -0.22
CAST-206ENST00000395812 PRRT2Q7Z6L0 340 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms