RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 SOX13Q9UN79 622 aa6.9□□□□□ -1.3
PTPN20-208ENST00000395727 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
PTPN20-208ENST00000395727 WDR81Q562E7 1941 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 TTC3P53804 2025 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 CUL9Q8IWT3 2517 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 IGKV6-21A0A0C4DH24 114 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 DDX39AO00148 427 aaKnown RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 RFXAPO00287 272 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 ZNF862O60290 1169 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 GPR32O75388 356 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 STAG3L1P0CL83 205 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 CD52P31358 61 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 SARSP49591 514 aaKnown RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 IGBP1P78318 339 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 PRKCEQ02156 737 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 PPP2R5CQ13362 524 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 NONOQ15233 471 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 TARBP2Q15633 366 aaKnown RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 LRCH2Q5VUJ6 765 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 TMEM192Q8IY95 271 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 FMR1NBQ8N0W7 255 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 FIBCD1Q8N539 461 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 FBF1Q8TES7 1133 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 GDPD5Q8WTR4 605 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 WASF1Q92558 559 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 FAM20AQ96MK3 541 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 CEP89Q96ST8 783 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 C17orf80Q9BSJ5 609 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 C11orf84Q9BUA3 381 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 TEKT3Q9BXF9 490 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 FAM49AQ9H0Q0 323 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 MUC3BQ9H195 1237 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 SLKQ9H2G2 1235 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 ELAC1Q9H777 363 aaKnown RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 CERS4Q9HA82 394 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 ERVK-5Q9HDB9 667 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 SH2B1Q9NRF2 756 aaPredicted RBP6.89□□□□□ -1.31
PTPN20-208ENST00000395727 RGS18Q9NS28 235 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 C1orf112Q9NSG2 853 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 NRBP2Q9NSY0 501 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 GABBR1Q9UBS5 961 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 TPCN1Q9ULQ1 816 aa6.89□□□□□ -1.31
PTPN20-208ENST00000395727 CHD7Q9P2D1 2997 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 MYH9P35579 1960 aaKnown RBP6.88□□□□□ -1.31
PTPN20-208ENST00000395727 KIAA1671Q9BY89 1806 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 CCDC194A0A1B0GVG4 234 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 C9IYK1 514 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 TM4SF5O14894 197 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 NCK2O43639 380 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 DKC1O60832 514 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPN20-208ENST00000395727 DEAF1O75398 565 aaPredicted RBP6.88□□□□□ -1.31
PTPN20-208ENST00000395727 RPS6KA5O75582 802 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 STBD1O95210 358 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 CTDNEP1O95476 244 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 TDP2O95551 362 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 MMP1P03956 469 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 CENPBP07199 599 aaPredicted RBP6.88□□□□□ -1.31
PTPN20-208ENST00000395727 SPATA31C1P0DKV0 1188 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 EPHA1P21709 976 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 TMOD1P28289 359 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 BMPR1AP36894 532 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 AK2P54819 239 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 FAM189BP81408 668 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 CDC42EP1Q00587 391 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 CCDC85BQ15834 202 aaPredicted RBP6.88□□□□□ -1.31
PTPN20-208ENST00000395727 PRRT3Q5FWE3 981 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 XKR3Q5GH77 459 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 FAM117BQ6P1L5 589 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 SLC24A5Q71RS6 500 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 NEK8Q86SG6 692 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 RTN4RL1Q86UN2 441 aaPredicted RBP6.88□□□□□ -1.31
PTPN20-208ENST00000395727 TMEM40Q8WWA1 233 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 BSNDQ8WZ55 320 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 GTF3C6Q969F1 213 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 MAP7D2Q96T17 732 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 TMX1Q9H3N1 280 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 UNC45AQ9H3U1 944 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 LIN7BQ9HAP6 207 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 ATG2AQ2TAZ0 1938 aa6.88□□□□□ -1.31
PTPN20-208ENST00000395727 UNC80Q8N2C7 3258 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 FSD2A1L4K1 749 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 KRBA1A5PL33 1030 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 METTL12A8MUP2 240 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 GAS2O43903 313 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 FDPSP14324 419 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 EIF4BP23588 611 aaKnown RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 GRIA4P48058 902 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 GPC3P51654 580 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 RAC1P63000 192 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 UBE3AQ05086 875 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 STK3Q13188 491 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 GPM6BQ13491 265 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 BTG3Q14201 252 aaPredicted RBP6.87□□□□□ -1.31
PTPN20-208ENST00000395727 GRM2Q14416 872 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 SETDB1Q15047 1291 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 UGCGQ16739 394 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 INF2Q27J81 1249 aa6.87□□□□□ -1.31
PTPN20-208ENST00000395727 LEXMQ3ZCV2 418 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms