RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 ADAM12O43184 909 aa23.35■■□□□ 1.33
TRAF4-203ENST00000394925 FGF13Q92913 245 aa23.35■■□□□ 1.33
TRAF4-203ENST00000394925 PDZD7Q9H5P4 517 aa23.35■■□□□ 1.33
TRAF4-203ENST00000394925 CEP250Q9BV73 2442 aa23.35■■□□□ 1.33
TRAF4-203ENST00000394925 VWA8A3KMH1 1905 aa23.35■■□□□ 1.33
TRAF4-203ENST00000394925 BTBD18B2RXH4 712 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 N4BP3O15049 544 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 XYLBO75191 536 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 RECQL4O94761 1208 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 ATP2B1P20020 1258 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 FOSBP53539 338 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 FAM187BQ17R55 369 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 CDCA2Q69YH5 1023 aaPredicted RBP23.34■■□□□ 1.33
TRAF4-203ENST00000394925 MTSS1LQ765P7 747 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 NOSTRINQ8IVI9 506 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 NECAB1Q8N987 351 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 MCPH1Q8NEM0 835 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 ITFG1Q8TB96 612 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 MTMR9Q96QG7 549 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 USP20Q9Y2K6 914 aa23.34■■□□□ 1.33
TRAF4-203ENST00000394925 COL4A3Q01955 1670 aa23.33■■□□□ 1.33
TRAF4-203ENST00000394925 SPATA31C1P0DKV0 1188 aa23.33■■□□□ 1.33
TRAF4-203ENST00000394925 LIG1P18858 919 aa23.33■■□□□ 1.33
TRAF4-203ENST00000394925 HOXA9P31269 272 aa23.33■■□□□ 1.33
TRAF4-203ENST00000394925 ELAVL2Q12926 359 aaKnown RBP23.33■■□□□ 1.33
TRAF4-203ENST00000394925 PRPF4BQ13523 1007 aaKnown RBP23.33■■□□□ 1.33
TRAF4-203ENST00000394925 SLC7A14Q8TBB6 771 aa23.33■■□□□ 1.33
TRAF4-203ENST00000394925 DNAH14Q0VDD8 3507 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 GPR179Q6PRD1 2367 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 KANSL1LA0AUZ9 987 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 OR1D2P34982 312 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 NAB2Q15742 525 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 MLF2Q15773 248 aaPredicted RBP23.32■■□□□ 1.32
TRAF4-203ENST00000394925 SLC44A4Q53GD3 710 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 AXDND1Q5T1B0 1012 aaPredicted RBP23.32■■□□□ 1.32
TRAF4-203ENST00000394925 PDXDC1Q6P996 788 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 CATSPER3Q86XQ3 398 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 DIS3L2Q8IYB7 885 aaKnown RBP23.32■■□□□ 1.32
TRAF4-203ENST00000394925 MAML2Q8IZL2 1156 aaPredicted RBP23.32■■□□□ 1.32
TRAF4-203ENST00000394925 DCLK2Q8N568 766 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 BSNDQ8WZ55 320 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 RUBCNQ92622 972 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 ADPGKQ9BRR6 497 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 C2orf40Q9H1Z8 148 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 TMEM60Q9H2L4 133 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 HCFC1R1Q9NWW0 138 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 GDAQ9Y2T3 454 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 NOTCH4Q99466 2003 aa23.32■■□□□ 1.32
TRAF4-203ENST00000394925 MED24O75448 989 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 PRKCBP05771 671 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 UBXN2BQ14CS0 331 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 ANKRD1Q15327 319 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 MAPK6Q16659 721 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 DGLUCYQ7Z3D6 616 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 KXD1Q9BQD3 176 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 BCO2Q9BYV7 579 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 TUFT1Q9NNX1 390 aa23.31■■□□□ 1.32
TRAF4-203ENST00000394925 SPATA6Q9NWH7 488 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-203ENST00000394925 MTF2Q9Y483 593 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-203ENST00000394925 PRKCQQ04759 706 aa23.3■■□□□ 1.32
TRAF4-203ENST00000394925 RAB33AQ14088 237 aa23.3■■□□□ 1.32
TRAF4-203ENST00000394925 EEF1DP3Q658K8 133 aa23.3■■□□□ 1.32
TRAF4-203ENST00000394925 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.3■■□□□ 1.32
TRAF4-203ENST00000394925 NACC1Q96RE7 527 aa23.3■■□□□ 1.32
TRAF4-203ENST00000394925 DDX23Q9BUQ8 820 aaKnown RBP23.3■■□□□ 1.32
TRAF4-203ENST00000394925 DNMT3BQ9UBC3 853 aaKnown RBP23.3■■□□□ 1.32
TRAF4-203ENST00000394925 TRIP11Q15643 1979 aa23.3■■□□□ 1.32
TRAF4-203ENST00000394925 FAM170BA6NMN3 283 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 ACKR2O00590 384 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 LAMTOR5O43504 91 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 LARGE1O95461 756 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 EDN1P05305 212 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 CD72P21854 359 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 IGFBP6P24592 240 aaPredicted RBP23.29■■□□□ 1.32
TRAF4-203ENST00000394925 MCM7P33993 719 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 ME3Q16798 604 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 UVSSAQ2YD98 709 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 PABPC1LQ4VXU2 614 aaKnown RBP23.29■■□□□ 1.32
TRAF4-203ENST00000394925 NPAS3Q8IXF0 933 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 DEPTORQ8TB45 409 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 ING5Q8WYH8 240 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 GTF3C6Q969F1 213 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 CCDC113Q9H0I3 377 aa23.29■■□□□ 1.32
TRAF4-203ENST00000394925 MED19A0JLT2 244 aaPredicted RBP23.28■■□□□ 1.32
TRAF4-203ENST00000394925 KINO60870 393 aaKnown RBP23.28■■□□□ 1.32
TRAF4-203ENST00000394925 B3GAT3O94766 335 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 FGFR3P22607 806 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 PFKPQ01813 784 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 TRIM29Q14134 588 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 GLRA4Q5JXX5 417 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 PADI6Q6TGC4 694 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 RSPO2Q6UXX9 243 aaPredicted RBP23.28■■□□□ 1.32
TRAF4-203ENST00000394925 SUMF1Q8NBK3 374 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 NSUN7Q8NE18 718 aaKnown RBP23.28■■□□□ 1.32
TRAF4-203ENST00000394925 MTRRQ9UBK8 725 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 CDY1Q9Y6F8 540 aa23.28■■□□□ 1.32
TRAF4-203ENST00000394925 ARHGEF35A5YM69 484 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 JAK2O60674 1132 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 POU2F2P09086 479 aa23.27■■□□□ 1.32
TRAF4-203ENST00000394925 CYP11B2P19099 503 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms