RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 NUP85Q9BW27 656 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 RASSF4Q9H2L5 321 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 ERVK-5Q9HDB9 667 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 BTBD7Q9P203 1132 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 AGO2Q9UKV8 859 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-207ENST00000394801 PTPRFP10586 1907 aa16.46■□□□□ 0.22
UBE2D3-207ENST00000394801 A0A0G2JMZ2 1700 aa16.46■□□□□ 0.22
UBE2D3-207ENST00000394801 GSTTP1A0A1W2PQM5 241 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 FAM170AA1A519 330 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 CTNNA2P26232 953 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 UAP1Q16222 522 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 CLEC16AQ2KHT3 1053 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 DUPD1Q68J44 220 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 ZNF677Q86XU0 584 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 SLC7A3Q8WY07 619 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 TMEM134Q9H6X4 195 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 ZNFX1Q9P2E3 1918 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 SIP14410 1827 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 K7ERI5 159 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 LDHAP00338 332 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 UBA1P22314 1058 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 CTNNA1P35221 906 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 RFC5P40937 340 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 MARCKSL1P49006 195 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 IRAK1P51617 712 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 NLRP11P59045 1033 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 DR1Q01658 176 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 PRKG1Q13976 671 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 NAA35Q5VZE5 725 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 SEPT14Q6ZU15 432 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 EFCAB13Q8IY85 973 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 ZNF653Q96CK0 615 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 PCYT2Q99447 389 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 ERP44Q9BS26 406 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 PI4K2AQ9BTU6 479 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 HAPLN2Q9GZV7 340 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 PLAAQ9Y263 795 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 PCDHB2Q9Y5E7 798 aa16.45■□□□□ 0.22
UBE2D3-207ENST00000394801 MYO1CO00159 1063 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 TGFB3P10600 412 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 ATP8B4Q8TF62 1192 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 FNBP1Q96RU3 617 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 CAPS2Q9BXY5 557 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 A0A0B4J269 797 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 PHF2O75151 1096 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 CHRNA3P32297 505 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 WNT7BP56706 349 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 BPIFB4P59827 614 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 WDR44Q5JSH3 913 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 SPDYCQ5MJ68 293 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 TDRD10Q5VZ19 366 aaKnown RBP16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 PRELID2Q8N945 189 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 NLGN2Q8NFZ4 835 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 DEPTORQ8TB45 409 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 NRBP2Q9NSY0 501 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 PCYOX1Q9UHG3 505 aa16.44■□□□□ 0.22
UBE2D3-207ENST00000394801 SOWAHBA6NEL2 793 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 HLA-DRAP01903 254 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 KRT5P13647 590 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 TNNI1P19237 187 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 FLT3P36888 993 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 NEDD9Q14511 834 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 R3HDM1Q15032 1099 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 CYP1B1Q16678 543 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 AADACL2Q6P093 401 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 TMC3Q7Z5M5 1100 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ZDHHC14Q8IZN3 488 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ELMO3Q96BJ8 720 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ATP6V1G3Q96LB4 118 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ADGRA2Q96PE1 1338 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 TMEM110-MUSTN1A8MSY1 372 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 HMGB1P1B2RPK0 211 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 TULP1O00294 542 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 PPFIA4O75335 1185 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 VNN1O95497 513 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 PYGMP11217 842 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 PTGIRP43119 386 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ACOT2P49753 483 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 KDM7AQ6ZMT4 941 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ADAT2Q7Z6V5 191 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 SRLQ86TD4 932 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ZBTB45Q96K62 511 aaPredicted RBP16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 TRIM51Q9BSJ1 452 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 TXLNGYQ9BZA5 131 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 TMBIM4Q9HC24 238 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 ZDHHC18Q9NUE0 388 aa16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 CNOT8Q9UFF9 292 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-207ENST00000394801 PPME1Q9Y570 386 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms