RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PGM5Q15124 567 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 MAP1SQ66K74 1059 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 OTOP1Q7RTM1 612 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 SMC1BQ8NDV3 1235 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 DNERQ8NFT8 737 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 NLRP4Q96MN2 994 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 SH2D3AQ9BRG2 576 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 MSTO1Q9BUK6 570 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 TSPYL2Q9H2G4 693 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 UBE2TQ9NPD8 197 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 DUOX1Q9NRD9 1551 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 IRS2Q9Y4H2 1338 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 SPOPO43791 374 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 FAM200BP0CF97 657 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 CD19P15391 556 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 NQO1P15559 274 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 GCLCP48506 637 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 HERVK_113P62684 666 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 IL17AQ16552 155 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 MAPK6Q16659 721 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 ANKRD20A2Q5SQ80 823 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 ANKRD20A1Q5TYW2 823 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 TRAPPC11Q7Z392 1133 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 ADAT2Q7Z6V5 191 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 ZBTB33Q86T24 672 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 C4orf32Q8N8J7 132 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 GDAP1Q8TB36 358 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 NLRP7Q8WX94 980 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 RUBCNQ92622 972 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 SLC5A5Q92911 643 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 XPO6Q96QU8 1125 aaKnown RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 GORASP1Q9BQQ3 440 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 EDEM3Q9BZQ6 932 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 MMADHCQ9H3L0 296 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 KDM4CQ9H3R0 1056 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 RRAGCQ9HB90 399 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 CEP72Q9P209 647 aa6.06□□□□□ -1.44
RFFL-202ENST00000394597 N4BP2Q86UW6 1770 aaPredicted RBP6.06□□□□□ -1.44
RFFL-202ENST00000394597 TTC26A0AVF1 554 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 EIF3DO15371 548 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFFL-202ENST00000394597 CLDN3O15551 220 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 NCK2O43639 380 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PPP1R11O60927 126 aaPredicted RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 TMCC1O94876 653 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 MYBP10242 640 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SERPINB3P29508 390 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PTK2Q05397 1052 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 GIT2Q14161 759 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 TMEM119Q4V9L6 283 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 CWF19L1Q69YN2 538 aaKnown RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 FAM47EQ6ZV65 393 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 RSPH3Q86UC2 560 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 FAM133AQ8N9E0 248 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PROCA1Q8NCQ7 364 aaPredicted RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 AGAP11Q8TF27 550 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 ANKRD36BP1Q96IX9 119 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 OLFM3Q96PB7 478 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 FMO2Q99518 471 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 LBHD1Q9BQE6 289 aaPredicted RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 NUDT12Q9BQG2 462 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 C2orf40Q9H1Z8 148 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SMARCAD1Q9H4L7 1026 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 KCNMB3Q9NPA1 279 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 CAPN11Q9UMQ6 739 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFFL-202ENST00000394597 SLC4A7Q9Y6M7 1214 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 NVLO15381 856 aaKnown RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 SLC16A3O15427 465 aaKnown RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 RTN3O95197 1032 aaPredicted RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 PSMD7P51665 324 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 VAMP7P51809 220 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PLTPP55058 493 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SNX16P57768 344 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 ACTR2P61160 394 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 C10orf76Q5T2E6 689 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SLC30A10Q6XR72 485 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 UBL4BQ8N7F7 174 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SCFD2Q8WU76 684 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 RAPGEF5Q92565 580 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 HAS1Q92839 578 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 MRRFQ96E11 262 aaKnown RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 SMARCAL1Q9NZC9 954 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 FBXL5Q9UKA1 691 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PCDHA13Q9Y5I0 950 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 ITIH6Q6UXX5 1313 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 WNT7AO00755 349 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SHOX2O60902 331 aaPredicted RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 NOL3O60936 208 aaKnown RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 GFPT2O94808 682 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SLITRK3O94933 977 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 TROVE2P10155 538 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFFL-202ENST00000394597 ABCB4P21439 1286 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PTGER2P43116 358 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PRKCEQ02156 737 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PPIL2Q13356 520 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PPP2R5CQ13362 524 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 SEL1L2Q5TEA6 688 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 PLA2G4FQ68DD2 849 aa6.05□□□□□ -1.44
RFFL-202ENST00000394597 CRELD2Q6UXH1 353 aaPredicted RBP6.05□□□□□ -1.44
RFFL-202ENST00000394597 LCA5Q86VQ0 697 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms