RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 EEPD1Q7L9B9 569 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 FAM160B2Q86V87 743 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 ATP6V0A1Q93050 837 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 HSD17B14Q9BPX1 270 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 MXRA8Q9BRK3 442 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 GTF3C4Q9UKN8 822 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 GINS2Q9Y248 185 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 GJA3Q9Y6H8 435 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 WDR64B1ANS9 1081 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 STRIP1Q5VSL9 837 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 BSPRYQ5W0U4 402 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 CCDC62Q6P9F0 684 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 CEP128Q6ZU80 1094 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 TRAIPQ9BWF2 469 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 OSBPL8Q9BZF1 889 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 DNAJC18Q9H819 358 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
PCDH1-203ENST00000394536 SKAP2O75563 359 aaPredicted RBP17.16■□□□□ 0.34
PCDH1-203ENST00000394536 PDHA1P08559 390 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 PDIA2Q13087 525 aaKnown RBP17.16■□□□□ 0.34
PCDH1-203ENST00000394536 SEZ6Q53EL9 994 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 YTHDF3Q7Z739 585 aaKnown RBP17.16■□□□□ 0.34
PCDH1-203ENST00000394536 PPFIBP2Q8ND30 876 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 RILPQ96NA2 401 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 TMEM39BQ9GZU3 492 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 GINM1Q9NU53 330 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 CYP3A7-CYP3A51PA0A087WV96 503 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
PCDH1-203ENST00000394536 MAPK13O15264 365 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 CYP3A7P24462 503 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 GNA15P30679 374 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 LLGL2Q6P1M3 1020 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 RFX8Q6ZV50 586 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 RHOT1Q8IXI2 618 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 ZDHHC15Q96MV8 337 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 PCSK1NQ9UHG2 260 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 SUFUQ9UMX1 484 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 BCL9LQ86UU0 1499 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 PARP4Q9UKK3 1724 aaKnown RBP17.16■□□□□ 0.34
PCDH1-203ENST00000394536 BTNL10A8MVZ5 291 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 NFIBO00712 420 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 HOXD13P35453 343 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 PLCB4Q15147 1175 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 TSNAXIP1Q2TAA8 658 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 JDP2Q8WYK2 163 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 QTRT2Q9H974 415 aaKnown RBP17.16■□□□□ 0.34
PCDH1-203ENST00000394536 SIX2Q9NPC8 291 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 TXLNGQ9NUQ3 528 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 FAM198AQ9UFP1 575 aa17.16■□□□□ 0.34
PCDH1-203ENST00000394536 CFAP73A6NFT4 308 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
PCDH1-203ENST00000394536 ANP32DO95626 131 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 PSMC5P62195 406 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 LMNB2Q03252 620 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 RCN2Q14257 317 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 PRCCQ92733 491 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-203ENST00000394536 TRIM11Q96F44 468 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 RPS6KC1Q96S38 1066 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 SLC12A6Q9UHW9 1150 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
PCDH1-203ENST00000394536 GJB6O95452 261 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 DESP17661 470 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 EIF1ADQ8N9N8 165 aaKnown RBP17.15■□□□□ 0.34
PCDH1-203ENST00000394536 SPIRE2Q8WWL2 714 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 TTC17Q96AE7 1141 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 KDM4CQ9H3R0 1056 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 TRABDQ9H4I3 376 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 SNED1Q8TER0 1413 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 STAM2O75886 525 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 PIAS1O75925 651 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 ASNSP08243 561 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 MSH2P43246 934 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 AUHQ13825 339 aaKnown RBP17.15■□□□□ 0.34
PCDH1-203ENST00000394536 SPOPLQ6IQ16 392 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 SLC17A8Q8NDX2 589 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 EPS8L1Q8TE68 723 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 MORC4Q8TE76 937 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 SPDL1Q96EA4 605 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 PGM2Q96G03 612 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 MSTO1Q9BUK6 570 aa17.15■□□□□ 0.34
PCDH1-203ENST00000394536 DDX3YO15523 660 aaKnown RBP17.14■□□□□ 0.33
PCDH1-203ENST00000394536 CREB1P16220 341 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 PHBP35232 272 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 MAGEA4P43358 317 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 IRX4P78413 519 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 SV2AQ7L0J3 742 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 SLC7A3Q8WY07 619 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 TBC1D22BQ9NU19 505 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 NEU2Q9Y3R4 380 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 SLC26A4O43511 780 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 BAG2O95816 211 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 KCNJ2P63252 427 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 CDR2Q01850 454 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 CENPUQ71F23 418 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 C3orf20Q8ND61 904 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 GMCL1Q96IK5 515 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 VAV3Q9UKW4 847 aa17.14■□□□□ 0.33
PCDH1-203ENST00000394536 NUP188Q5SRE5 1749 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms