RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 TMCC3Q9ULS5 477 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 ANP32DO95626 131 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SLC7A5Q01650 507 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 ITKQ08881 620 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SPIDRQ14159 915 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 FGD2Q7Z6J4 655 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SAV1Q9H4B6 383 aaPredicted RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 CEP72Q9P209 647 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 VAV3Q9UKW4 847 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 ATXN2Q99700 1313 aaKnown RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 ABCC5O15440 1437 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 LRRIQ4A6NIV6 560 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 ARHGEF16Q5VV41 709 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 HNRNPLLQ8WVV9 542 aaKnown RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 ROPN1BQ9BZX4 212 aaPredicted RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 ROPN1Q9HAT0 212 aaPredicted RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 VPS4AQ9UN37 437 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 FAM92AA1XBS5 289 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 WASLO00401 505 aaPredicted RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 MFAP3LO75121 409 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 MBD4O95243 580 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 FCGR1AP12314 374 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 RFX1P22670 979 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 GPTP24298 496 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 LSP1P33241 339 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 CASP5P51878 434 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 POU5F1Q01860 360 aaKnown RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 ABCB5Q2M3G0 1257 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 ARHGAP17Q68EM7 881 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 LONP2Q86WA8 852 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SEC16BQ96JE7 1060 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 CDH16O75309 829 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 CYP2J2P51589 502 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 COG2Q14746 738 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 PDCD4Q53EL6 469 aaKnown RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 TNNI3KQ59H18 835 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 RRM2BQ7LG56 351 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 GATAD2BQ8WXI9 593 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 ANKRD7Q92527 254 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SETDB2Q96T68 719 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 FPGT-TNNI3KV9GXZ4 949 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 TRIM66O15016 1216 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 CRELD2Q6UXH1 353 aaPredicted RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 PLA2G4DQ86XP0 818 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 JADE3Q92613 823 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 TCEAL3Q969E4 200 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 THTPAQ9BU02 230 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SOWAHDA6NJG2 315 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 M0QZ92 97 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 CCT8P50990 548 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 TIMM50Q3ZCQ8 353 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 CENPPQ6IPU0 288 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 DNAJC24Q6P3W2 148 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 NLRX1Q86UT6 975 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 RBM46Q8TBY0 533 aaKnown RBP9.51□□□□□ -0.89
CHD2-201ENST00000394196 SNX19Q92543 992 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 WNT8AQ9H1J5 351 aa9.51□□□□□ -0.89
CHD2-201ENST00000394196 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 MSH3P20585 1137 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 TFCP2Q12800 502 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
CHD2-201ENST00000394196 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 hCG_1984214I3L0E3 225 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 TTC27Q6P3X3 843 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 PPP2R3CQ969Q6 453 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 CIDECQ96AQ7 238 aaPredicted RBP9.5□□□□□ -0.89
CHD2-201ENST00000394196 CPSF3Q9UKF6 684 aaKnown RBP9.5□□□□□ -0.89
CHD2-201ENST00000394196 SF3B1O75533 1304 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 87.1
CHD2-201ENST00000394196 TRPC5OSA6NMA1 111 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 PEX1O43933 1283 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 MOCS3O95396 460 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 RHAGQ02094 409 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 ATP1A4Q13733 1029 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 PDZK1Q5T2W1 519 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 DCLK2Q8N568 766 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 SH3TC2Q8TF17 1288 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 MRPL48Q96GC5 212 aaKnown RBP9.5□□□□□ -0.89
CHD2-201ENST00000394196 NUP50Q9UKX7 468 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 PCF11O94913 1555 aaKnown RBP9.5□□□□□ -0.89
CHD2-201ENST00000394196 UQCRBP14927 111 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 CXCR5P32302 372 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 IMPG1Q17R60 797 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 C1orf94Q6P1W5 598 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 FAM43BQ6ZT52 329 aaPredicted RBP9.5□□□□□ -0.89
CHD2-201ENST00000394196 CLEC4FQ8N1N0 589 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 KLHL4Q9C0H6 718 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 PRDM16Q9HAZ2 1276 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 TBC1D7Q9P0N9 293 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 SYNPO2Q9UMS6 1093 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 PCDHA5Q9Y5H7 936 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 EXTL3O43909 919 aa9.5□□□□□ -0.89
CHD2-201ENST00000394196 COX10Q12887 443 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms