RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 RIN2Q8WYP3 895 aaPredicted RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 SEC14L1Q92503 715 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 FAM167AQ96KS9 214 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 KREMEN1Q96MU8 473 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 FAM213AQ9BRX8 229 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 CAPS2Q9BXY5 557 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 FAM129AQ9BZQ8 928 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PORCNQ9H237 461 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 DHX33Q9H6R0 707 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 PARP2Q9UGN5 583 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 AMACRQ9UHK6 382 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 AGO2Q9UKV8 859 aaKnown RBP7.73□□□□□ -1.17
SMAD1-202ENST00000394092 MTUS1Q9ULD2 1270 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 COG5Q9UP83 839 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 ALG6Q9Y672 507 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 STYXL1Q9Y6J8 313 aa7.73□□□□□ -1.17
SMAD1-202ENST00000394092 GOLGB1Q14789 3259 aaKnown RBP7.72□□□□□ -1.17
SMAD1-202ENST00000394092 KRT5P13647 590 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 CHRNB2P17787 502 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 TBXAS1P24557 533 aaPredicted RBP7.72□□□□□ -1.17
SMAD1-202ENST00000394092 CTNNA1P35221 906 aaKnown RBP7.72□□□□□ -1.17
SMAD1-202ENST00000394092 PIK3CAP42336 1068 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 AP3M2P53677 418 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 CLDN10P78369 228 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 SKOR1P84550 965 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 DR1Q01658 176 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 ACAD10Q6JQN1 1059 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 KCNV1Q6PIU1 500 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 LBX2Q6XYB7 198 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 TRIM72Q6ZMU5 477 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 SLC47A2Q86VL8 602 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 IQCKQ8N0W5 287 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 ARFGAP2Q8N6H7 521 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 ZSWIM2Q8NEG5 633 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 TAS1R2Q8TE23 839 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 MAIP1Q8WWC4 291 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 SEMA4DQ92854 862 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 CEP89Q96ST8 783 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 HINFPQ9BQA5 517 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 NUP85Q9BW27 656 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 NIFKQ9BYG3 293 aaKnown RBP7.72□□□□□ -1.17
SMAD1-202ENST00000394092 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
SMAD1-202ENST00000394092 NRBP2Q9NSY0 501 aa7.72□□□□□ -1.17
SMAD1-202ENST00000394092 IGKV6D-21A0A0A0MT36 114 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 LRRIQ4A6NIV6 560 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 TMEM110-MUSTN1A8MSY1 372 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 K7ERI5 159 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 PODXLO00592 558 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 TTI1O43156 1089 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 PPFIA4O75335 1185 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 MMEP08473 750 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 FAM153BP0C7A2 387 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 MYZAPP0CAP1 466 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 TGFB3P10600 412 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 ITGA4P13612 1032 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 TNNI1P19237 187 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 COMTP21964 271 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 ECHS1P30084 290 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 MAN1A1P33908 653 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 IREB2P48200 963 aaKnown RBP7.71□□□□□ -1.18
SMAD1-202ENST00000394092 CDR1P51861 262 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 EIF3BP55884 814 aaKnown RBP7.71□□□□□ -1.18
SMAD1-202ENST00000394092 BIRC3Q13489 604 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 MESDQ14696 234 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 CLEC16AQ2KHT3 1053 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 ZACNQ401N2 412 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 FAM153CQ494X1 144 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 TTMPQ5BVD1 217 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 DCAF12L1Q5VU92 463 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 KDM7AQ6ZMT4 941 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 C15orf39Q6ZRI6 1047 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 CYFIP1Q7L576 1253 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 CROCCP2Q86T23 111 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 PROCA1Q8NCQ7 364 aaPredicted RBP7.71□□□□□ -1.18
SMAD1-202ENST00000394092 TCP11Q8WWU5 503 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 PSPC1Q8WXF1 523 aaKnown RBP7.71□□□□□ -1.18
SMAD1-202ENST00000394092 KAT5Q92993 513 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 PCDHB18PQ96TA0 734 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 FMO2Q99518 471 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 IMPG2Q9BZV3 1241 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 TOPORSQ9NS56 1045 aaPredicted RBP7.71□□□□□ -1.18
SMAD1-202ENST00000394092 FAM153AQ9UHL3 310 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 PLAAQ9Y263 795 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 PCDHB2Q9Y5E7 798 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 SNCAIPQ9Y6H5 919 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 ZSWIM8A7E2V4 1837 aa7.71□□□□□ -1.18
SMAD1-202ENST00000394092 DAPK3O43293 454 aa7.7□□□□□ -1.18
SMAD1-202ENST00000394092 USP2O75604 605 aaPredicted RBP7.7□□□□□ -1.18
SMAD1-202ENST00000394092 FARP2O94887 1054 aaPredicted RBP7.7□□□□□ -1.18
SMAD1-202ENST00000394092 SLC25A27O95847 323 aa7.7□□□□□ -1.18
SMAD1-202ENST00000394092 HLA-DRAP01903 254 aa7.7□□□□□ -1.18
SMAD1-202ENST00000394092 UBA1P22314 1058 aaKnown RBP7.7□□□□□ -1.18
SMAD1-202ENST00000394092 EDNRBP24530 442 aa7.7□□□□□ -1.18
SMAD1-202ENST00000394092 ARL2P36404 184 aa7.7□□□□□ -1.18
SMAD1-202ENST00000394092 HSD17B3P37058 310 aa7.7□□□□□ -1.18
SMAD1-202ENST00000394092 SLC1A1P43005 524 aa7.7□□□□□ -1.18
SMAD1-202ENST00000394092 NSFP46459 744 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms