RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ACO2Q99798 780 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 CLSTN3Q9BQT9 956 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 RAB34Q9BZG1 259 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 NT5C3AQ9H0P0 336 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 ARHGAP28Q9P2N2 729 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 TNFSF13BQ9Y275 285 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 STK24Q9Y6E0 443 aa20.08■□□□□ 0.81
PDLIM7-205ENST00000393551 CCDC169A6NNP5 214 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 ABLIM1O14639 778 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 ADAM12O43184 909 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 ST18O60284 1047 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 GJB2P29033 226 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 MRE11P49959 708 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 ACSF2Q96CM8 615 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 TTPALQ9BTX7 342 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 PLEKHA4Q9H4M7 779 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 KCNK12Q9HB15 430 aa20.07■□□□□ 0.8
PDLIM7-205ENST00000393551 SFI1A8K8P3 1242 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 CITO14578 2027 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 MEFVO15553 781 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 RILPL1Q5EBL4 403 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 HYIQ5T013 277 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 ALKAL1Q6UXT8 129 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 C3orf58Q8NDZ4 430 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 PIK3R5Q8WYR1 880 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 SMG7Q92540 1137 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 MYADMQ96S97 322 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 CDT1Q9H211 546 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 TMEM134Q9H6X4 195 aa20.06■□□□□ 0.8
PDLIM7-205ENST00000393551 CLUHO75153 1309 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 PHLPP2Q6ZVD8 1323 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 PROZP22891 400 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 CLCNKBP51801 687 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 SOX4Q06945 474 aaPredicted RBP20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 XKR4Q5GH76 650 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 CYP26C1Q6V0L0 522 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 CEP57Q86XR8 500 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 TMEM105Q8N8V8 129 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 LRRC15Q8TF66 581 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 RSAD2Q8WXG1 361 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 PLIN2Q99541 437 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 TARS2Q9BW92 718 aaKnown RBP20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 PRKD2Q9BZL6 878 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 GOLGA2P5Q9HBQ8 144 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 DPP7Q9UHL4 492 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 FBXW11Q9UKB1 542 aa20.05■□□□□ 0.8
PDLIM7-205ENST00000393551 NOTCH4Q99466 2003 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 SMIM28A0A1B0GU29 152 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 ZMYND10O75800 440 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 GUCY2CP25092 1073 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 GRM5P41594 1212 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 RAD51AP2Q09MP3 1159 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 DMP1Q13316 513 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 TDGQ13569 410 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 ZRSR1Q15695 479 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 PSMD5Q16401 504 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 UPP1Q16831 310 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 RSPO2Q6UXX9 243 aaPredicted RBP20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 ZMAT2Q96NC0 199 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 NTPCRQ9BSD7 190 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 KMT5AQ9NQR1 393 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 ZDHHC7Q9NXF8 308 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 KIF3AQ9Y496 699 aa20.04■□□□□ 0.8
PDLIM7-205ENST00000393551 PDCD11Q14690 1871 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 CFAP54Q96N23 3096 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 VWA3AA6NCI4 1184 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 TMEM189-UBE2V1I3L0A0 370 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 SLC16A4O15374 487 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 NARSO43776 548 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 FGFR3P22607 806 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 PTPN5P54829 565 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 SLC12A3P55017 1021 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 OSTNP61366 133 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 CREMQ03060 361 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 SYT2Q8N9I0 419 aaPredicted RBP20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 ZBTB45Q96K62 511 aaPredicted RBP20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 DRC1Q96MC2 740 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 PRRX2Q99811 253 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 MRPL4Q9BYD3 311 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 EPS15L1Q9UBC2 864 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 DUSP12Q9UNI6 340 aa20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 ZFHX2Q9C0A1 2572 aaPredicted RBP20.03■□□□□ 0.8
PDLIM7-205ENST00000393551 I3L4J1 428 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 B3GAT3O94766 335 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 GBP2P32456 591 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 ZNF568Q3ZCX4 644 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 ELMSAN1Q6PJG2 1045 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 DCLRE1AQ6PJP8 1040 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 TMEM161BQ8NDZ6 487 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 TBC1D32Q96NH3 1257 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 C17orf75Q9HAS0 396 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 IGSF9Q9P2J2 1179 aa20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-205ENST00000393551 NPHP3-ACAD11A0A0J9YXS1 232 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 H3BQV1 296 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 NPR3P17342 541 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 BRCC3P46736 316 aa20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 ELAVL2Q12926 359 aaKnown RBP20.01■□□□□ 0.79
PDLIM7-205ENST00000393551 TMEM119Q4V9L6 283 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms