RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TISP43B9A030 160 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 BIN1O00499 593 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 P4HA2O15460 535 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 FAM163BP0C2L3 166 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 NR2F2P24468 414 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 EEF1GP26641 437 aaKnown RBP14.43□□□□□ -0.1
USP44-202ENST00000393091 SMAD3P84022 425 aaKnown RBP14.43□□□□□ -0.1
USP44-202ENST00000393091 ADAM9Q13443 819 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 C1orf220Q5T0J3 134 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 FAM114A1Q8IWE2 563 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 TRIM59Q8IWR1 403 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 CGRRF1Q99675 332 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 IKZF4Q9H2S9 585 aa14.43□□□□□ -0.1
USP44-202ENST00000393091 TMEM265A0A087WTH1 108 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 SMTNL1A8MU46 457 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 C5orf67F2Z3F1 127 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 STX10O60499 249 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 AKAP3O75969 853 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 SYN1P17600 705 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 MYL5Q02045 173 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 LIMS2Q7Z4I7 341 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 HERC6Q8IVU3 1022 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 VRTNQ9H8Y1 702 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 SLC38A7Q9NVC3 462 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 ANO9A1A5B4 782 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 ARL5CA6NH57 179 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 PTGESO14684 152 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 LRIT3Q3SXY7 679 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 PARD3BQ8TEW8 1205 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 SAMD11Q96NU1 681 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 RPF1Q9H9Y2 349 aaKnown RBP14.42□□□□□ -0.1
USP44-202ENST00000393091 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
USP44-202ENST00000393091 GINS2Q9Y248 185 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 FRMD4BQ9Y2L6 1034 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 COQ4Q9Y3A0 265 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 DAAM1Q9Y4D1 1078 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 RECQL4O94761 1208 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 ANO6Q4KMQ2 910 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 SPATA18Q8TC71 538 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 CWH43Q9H720 699 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 SNTG2Q9NY99 539 aa14.42□□□□□ -0.1
USP44-202ENST00000393091 GTPBP10A4D1E9 387 aaKnown RBP14.41□□□□□ -0.1
USP44-202ENST00000393091 ACRP10323 421 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 RPL9P32969 192 aaKnown RBP14.41□□□□□ -0.1
USP44-202ENST00000393091 YARSP54577 528 aaKnown RBP14.41□□□□□ -0.1
USP44-202ENST00000393091 USP37Q86T82 979 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 FAM200AQ8TCP9 573 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 RAD9AQ99638 391 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 RWDD3Q9Y3V2 267 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 SLC4A7Q9Y6M7 1214 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 TRIM49BA6NDI0 452 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 TNFSF9P41273 254 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 KCNJ6P48051 423 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 AARSP49588 968 aaKnown RBP eCLIP14.41□□□□□ -0.1
USP44-202ENST00000393091 DEFB103AP81534 67 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 ZBTB41Q5SVQ8 909 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 APTXQ7Z2E3 356 aaKnown RBP14.41□□□□□ -0.1
USP44-202ENST00000393091 RNF168Q8IYW5 571 aaPredicted RBP14.41□□□□□ -0.1
USP44-202ENST00000393091 TDHQ8IZJ6 230 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 INSL6Q9Y581 213 aa14.41□□□□□ -0.1
USP44-202ENST00000393091 BFSP1Q12934 665 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 SHHQ15465 462 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 TPRNQ4KMQ1 711 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 NOMO2Q5JPE7 1267 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 TMEM192Q8IY95 271 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 LRRC43Q8N309 656 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 CSGALNACT2Q8N6G5 542 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 PLEKHO2Q8TD55 490 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 TSPY26PQ9H489 355 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 RBAKQ9NYW8 714 aaPredicted RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 ANKFY1Q9P2R3 1169 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 SMIM28A0A1B0GU29 152 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 EPB41P11171 864 aaKnown RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 SPAG1Q07617 926 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 COLGALT2Q8IYK4 626 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 ZSWIM2Q8NEG5 633 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 PLVAPQ9BX97 442 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 TRIM6Q9C030 488 aaPredicted RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 CXXC1Q9P0U4 656 aaPredicted RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 LACTBL1A8MY62 500 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 XPOTO43592 962 aaKnown RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 PRPF38BQ5VTL8 546 aaKnown RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 GPR153Q6NV75 609 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 GLB1LQ6UWU2 654 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 CBWD2Q8IUF1 395 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 FAM186BQ8IYM0 893 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 DDX27Q96GQ7 796 aaKnown RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 FAM213AQ9BRX8 229 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 DNAJC25Q9H1X3 360 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 ITGA11Q9UKX5 1188 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 UBQLN1Q9UMX0 589 aaKnown RBP14.4□□□□□ -0.1
USP44-202ENST00000393091 MAPK8IP1Q9UQF2 711 aa14.4□□□□□ -0.1
USP44-202ENST00000393091 CLIC2O15247 247 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 C1RP00736 705 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 C4BPAP04003 597 aaKnown RBP14.39□□□□□ -0.11
USP44-202ENST00000393091 CASP4P49662 377 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 ZBTB33Q86T24 672 aa14.39□□□□□ -0.11
USP44-202ENST00000393091 CEP120Q8N960 986 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms