RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 RPTORQ8N122 1335 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
SHTN1-204ENST00000392903 A8MUI8 341 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 O00370 1275 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 BCRP11274 1271 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 IFNAR2P48551 515 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 JAM2P57087 298 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 DLG4P78352 724 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 ATP11AP98196 1134 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 TNFAIP1Q13829 316 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 UGCGQ16739 394 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 PCNX4Q63HM2 1172 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 ZDHHC24Q6UX98 284 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 RMDN3Q96TC7 470 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 YIPF3Q9GZM5 350 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 GPRC5CQ9NQ84 441 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 RIPK3Q9Y572 518 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 CD2APQ9Y5K6 639 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 UBIAD1Q9Y5Z9 338 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
SHTN1-204ENST00000392903 NFKBIEO00221 500 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 GJB6O95452 261 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 H2AFZP0C0S5 128 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 QARSP47897 775 aaKnown RBP16.08■□□□□ 0.17
SHTN1-204ENST00000392903 RARRES1P49788 294 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 DHX34Q14147 1143 aaKnown RBP16.08■□□□□ 0.17
SHTN1-204ENST00000392903 PGM5Q15124 567 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 H2AFVQ71UI9 128 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 TAOK1Q7L7X3 1001 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 DMAC2Q9NW81 257 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 DNAJC12Q9UKB3 198 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 AMFRQ9UKV5 643 aa16.08■□□□□ 0.17
SHTN1-204ENST00000392903 EVI5O60447 810 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 LRRN2O75325 713 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 YWHABP31946 246 aaKnown RBP16.08■□□□□ 0.16
SHTN1-204ENST00000392903 GMPSP49915 693 aaPredicted RBP16.08■□□□□ 0.16
SHTN1-204ENST00000392903 ARHGAP44Q17R89 818 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 RNF207Q6ZRF8 634 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 KIF2BQ8N4N8 673 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 ZSWIM2Q8NEG5 633 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 U2AF1L4Q8WU68 220 aaKnown RBP16.08■□□□□ 0.16
SHTN1-204ENST00000392903 NAF1Q96HR8 494 aaKnown RBP16.08■□□□□ 0.16
SHTN1-204ENST00000392903 NAP1L3Q99457 506 aaPredicted RBP16.08■□□□□ 0.16
SHTN1-204ENST00000392903 RXFP1Q9HBX9 757 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
SHTN1-204ENST00000392903 PPP1R9AQ9ULJ8 1098 aa16.08■□□□□ 0.16
SHTN1-204ENST00000392903 GTPBP10A4D1E9 387 aaKnown RBP16.07■□□□□ 0.16
SHTN1-204ENST00000392903 SKIV2L2P42285 1042 aaKnown RBP16.07■□□□□ 0.16
SHTN1-204ENST00000392903 PLTPP55058 493 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 DRAP1Q14919 205 aaPredicted RBP16.07■□□□□ 0.16
SHTN1-204ENST00000392903 TAF11Q15544 211 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 MFSD5Q6N075 450 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 FBXO25Q8TCJ0 367 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 SLC16A10Q8TF71 515 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 ATG4CQ96DT6 458 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 MKNK1Q9BUB5 465 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.167e-6■■■■■ 74.5
SHTN1-204ENST00000392903 GGT7Q9UJ14 662 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 SMIM23A6NLE4 172 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 DDX3XO00571 662 aaKnown RBP eCLIP16.07■□□□□ 0.16
SHTN1-204ENST00000392903 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
SHTN1-204ENST00000392903 CCNB1P14635 433 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 STAT1P42224 750 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 ARHGEF16Q5VV41 709 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 GLYCTKQ8IVS8 523 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 CBWD1Q9BRT8 395 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 STRA6Q9BX79 667 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
SHTN1-204ENST00000392903 ARL2BPQ9Y2Y0 163 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 LRRC42Q9Y546 428 aa16.07■□□□□ 0.16
SHTN1-204ENST00000392903 ABLIM1O14639 778 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 DDX3YO15523 660 aaKnown RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 NEFHP12036 1026 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 ATP4AP20648 1035 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 GBP1P32455 592 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 ZNF280AP59817 542 aaPredicted RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 BFSP1Q12934 665 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 NFIL3Q16649 462 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 THEMIS2Q5TEJ8 643 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 DCAF12L1Q5VU92 463 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 VPS36Q86VN1 386 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 JAMLQ86YT9 394 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 CARD9Q9H257 536 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 FGFR1OP2Q9NVK5 253 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 CPSF2Q9P2I0 782 aaKnown RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 STK38LQ9Y2H1 464 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 VWA5AO00534 786 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 SLC16A4O15374 487 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 ZBED4O75132 1171 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 CCNE2O96020 404 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 SOX5P35711 763 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 PEX3P56589 373 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 TGFB2P61812 414 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 AUHQ13825 339 aaKnown RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 BAATQ14032 418 aaPredicted RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 CLUL1Q15846 466 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 SLC30A9Q6PML9 568 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms