RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 UPP2O95045 317 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 TAGLNQ01995 201 aaKnown RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 MAPK7Q13164 816 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 IFI16Q16666 785 aaKnown RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 ABCB5Q2M3G0 1257 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 C11orf91Q3C1V1 193 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 NOP9Q86U38 636 aaKnown RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 ATAD5Q96QE3 1844 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 CYP3A7-CYP3A51PA0A087WV96 503 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 RGS16O15492 202 aaPredicted RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 CYP3A7P24462 503 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 KCNJ2P63252 427 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 RASA3Q14644 834 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 ZNF720Q7Z2F6 126 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 RAVER1Q8IY67 606 aaKnown RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 ARFGAP2Q8N6H7 521 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 CHMP6Q96FZ7 201 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 SYT11Q9BT88 431 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 HEMGNQ9BXL5 484 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 STK33Q9BYT3 514 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 FGFR1OP2Q9NVK5 253 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 PNMA3Q9UL41 463 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 TELO2Q9Y4R8 837 aa12.36□□□□□ -0.43
CCDC57-205ENST00000392346 BZW2Q9Y6E2 419 aaKnown RBP12.36□□□□□ -0.43
CCDC57-205ENST00000392346 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 PSMC4P43686 418 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 SP4Q02446 784 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 TAB3Q8N5C8 712 aaPredicted RBP12.35□□□□□ -0.43
CCDC57-205ENST00000392346 SUPT20HQ8NEM7 779 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 TXLNGYQ9BZA5 131 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 FAM129AQ9BZQ8 928 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 SIPA1L1O43166 1804 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 FOCADQ5VW36 1801 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 PFASO15067 1338 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
CCDC57-205ENST00000392346 SPOPO43791 374 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 TMEM253P0C7T8 217 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 RARAP10276 462 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 BMP3P12645 472 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 NF2P35240 595 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 PTGIRP43119 386 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 CDR1P51861 262 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 BFSP1Q12934 665 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 ERMARDQ5T6L9 678 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 TTC39BQ5VTQ0 682 aaPredicted RBP12.35□□□□□ -0.43
CCDC57-205ENST00000392346 PLA2G4FQ68DD2 849 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 C15orf52Q6ZUT6 534 aaKnown RBP12.35□□□□□ -0.43
CCDC57-205ENST00000392346 HS2ST1Q7LGA3 356 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 CCT6BQ92526 530 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 SEMA4DQ92854 862 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 TLCD1Q96CP7 247 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 MBOAT7Q96N66 472 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 CHST7Q9NS84 486 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 INTS9Q9NV88 658 aaKnown RBP12.35□□□□□ -0.43
CCDC57-205ENST00000392346 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■■■■ 26.8
CCDC57-205ENST00000392346 SWAP70Q9UH65 585 aa12.35□□□□□ -0.43
CCDC57-205ENST00000392346 DNAH12Q6ZR08 3092 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 BTNL10A8MVZ5 291 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 ADRB2P07550 413 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 SMTNP53814 917 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 BIRC3Q13489 604 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 SCARA3Q6AZY7 606 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 CBWD2Q8IUF1 395 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 SYCE1Q8N0S2 351 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 LMO3Q8TAP4 145 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 N4BP2L2Q92802 583 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-205ENST00000392346 ZNF317Q96PQ6 595 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-205ENST00000392346 SLC7A5P2Q9GIP4 190 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 FAM114A2Q9NRY5 505 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 SLC16A4O15374 487 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 CHRNB2P17787 502 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 NPEPPSP55786 919 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 Q4G0T1 1027 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 MYLK4Q86YV6 388 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-205ENST00000392346 STAMBPL1Q96FJ0 436 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 TACO1Q9BSH4 297 aaKnown RBP12.34□□□□□ -0.43
CCDC57-205ENST00000392346 ZNF577Q9BSK1 485 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 PABPC3Q9H361 631 aaKnown RBP12.34□□□□□ -0.43
CCDC57-205ENST00000392346 KCNK9Q9NPC2 374 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 STK38LQ9Y2H1 464 aa12.34□□□□□ -0.43
CCDC57-205ENST00000392346 NCANO14594 1321 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 PRSS47A8MTI9 375 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 PPIP5K2O43314 1243 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 UBOX5O94941 541 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 CETPP11597 493 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 MPP2Q14168 576 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 C1orf220Q5T0J3 134 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 NIM1KQ8IY84 436 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 VPS37AQ8NEZ2 397 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 LMBR1Q8WVP7 490 aa12.33□□□□□ -0.43
CCDC57-205ENST00000392346 SPOCK2Q92563 424 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms