RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 TMED10P49755 219 aaKnown RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 MAPRE2Q15555 327 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 SWT1Q5T5J6 900 aaKnown RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 SLC35G2Q8TBE7 412 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 IGDCC4Q8TDY8 1250 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 ZNF512BQ96KM6 892 aaPredicted RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 CEP170P1Q96L14 293 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 SYCE1LA8MT33 242 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 SCP2P22307 547 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 SLFN12LQ6IEE8 588 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 RFX8Q6ZV50 586 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 NSL1Q96IY1 281 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 FIS1Q9Y3D6 152 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 ENO1P06733 434 aaKnown RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 TRIM67Q6ZTA4 783 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 DHX38Q92620 1227 aaKnown RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 ZNF446Q9NWS9 450 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 GOLGA8MH3BSY2 632 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 ATP6V1G2O95670 118 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 EDRF1Q3B7T1 1238 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 TMEM259Q4ZIN3 620 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 SPOUT1Q5T280 376 aaKnown RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 TMEM47Q9BQJ4 181 aa20.82■□□□□ 0.92
SHANK1-203ENST00000391813 CHCHD3Q9NX63 227 aaKnown RBP20.82■□□□□ 0.92
SHANK1-203ENST00000391813 PPLO60437 1756 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 TMEM253P0C7T8 217 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 TRIP10Q15642 601 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 ATG9AQ7Z3C6 839 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 YTHDF3Q7Z739 585 aaKnown RBP20.81■□□□□ 0.92
SHANK1-203ENST00000391813 MDM1Q8TC05 714 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 SLC38A10Q9HBR0 1119 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 ADA2Q9NZK5 511 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 POLR1AO95602 1720 aaPredicted RBP20.81■□□□□ 0.92
SHANK1-203ENST00000391813 IQGAP1P46940 1657 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 ASAP2O43150 1006 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 KLHL2O95198 593 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 LDHAP00338 332 aaKnown RBP20.81■□□□□ 0.92
SHANK1-203ENST00000391813 GYS1P13807 737 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 VAMP7P51809 220 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 LAMB3Q13751 1172 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 FBXL13Q8NEE6 735 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 RBM46Q8TBY0 533 aaKnown RBP20.81■□□□□ 0.92
SHANK1-203ENST00000391813 ZWILCHQ9H900 591 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 ABCB11O95342 1321 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 B2RBV5 119 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 SKOR1P84550 965 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 STK4Q13043 487 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 OR6B2Q6IFH4 312 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 C11orf70Q9BRQ4 267 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 XPOTO43592 962 aaKnown RBP20.81■□□□□ 0.92
SHANK1-203ENST00000391813 DEAF1O75398 565 aaPredicted RBP20.81■□□□□ 0.92
SHANK1-203ENST00000391813 GNAT1P11488 350 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 FAM149B1Q96BN6 582 aa20.81■□□□□ 0.92
SHANK1-203ENST00000391813 ARSEP51690 589 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 PTPAQ15257 358 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 STX18Q9P2W9 335 aaKnown RBP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 PRKAG2Q9UGJ0 569 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 TNS2Q63HR2 1409 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 S100BP04271 92 aaPredicted RBP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 CTTNQ14247 550 aaKnown RBP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 VPS11Q9H270 941 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 L3MBTL1Q9Y468 752 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 POTEB3A0JP26 581 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 POTECB2RU33 542 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 TLR3O15455 904 aaKnown RBP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 SMARCA1P28370 1054 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 SERPINB10P48595 397 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 SPP2Q13103 211 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 CYTH1Q15438 398 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 ZNF746Q6NUN9 644 aaPredicted RBP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 POTEBQ6S5H4 581 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 AGBL3Q8NEM8 1001 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 SEPT9Q9UHD8 586 aaPredicted RBP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 EFTUD2Q15029 972 aaKnown RBP eCLIP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 ZCWPW2Q504Y3 356 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 SMIM5Q71RC9 77 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 USP6NLQ92738 828 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 MAML3Q96JK9 1138 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 THTPAQ9BU02 230 aa20.8■□□□□ 0.92
SHANK1-203ENST00000391813 CACYBPQ9HB71 228 aaKnown RBP20.8■□□□□ 0.92
SHANK1-203ENST00000391813 APOA1P02647 267 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 KCNA4P22459 653 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 OLFML2BQ68BL8 750 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 GOLGA8IPA6NC78 632 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 GOLGA8JA6NMD2 632 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 SFI1A8K8P3 1242 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 PLSCR1O15162 318 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 ARHGEF9O43307 516 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 ITKQ08881 620 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 ATP6V1E2Q96A05 226 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 MED10Q9BTT4 135 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 MRGBPQ9NV56 204 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 TFAMQ00059 246 aaKnown RBP20.79■□□□□ 0.92
SHANK1-203ENST00000391813 PRPF38AQ8NAV1 312 aaKnown RBP20.79■□□□□ 0.92
SHANK1-203ENST00000391813 NEDD1Q8NHV4 660 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 C9orf72Q96LT7 481 aa20.79■□□□□ 0.92
SHANK1-203ENST00000391813 SRRM3A6NNA2 597 aaPredicted RBP20.78■□□□□ 0.92
SHANK1-203ENST00000391813 SMAPO00193 183 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms