RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 AGAP9Q5VTM2 703 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 KRT26Q7Z3Y9 468 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 ZNF575Q86XF7 245 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 ZFP28Q8NHY6 868 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 ASB10Q8WXI3 467 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 FATE1Q969F0 183 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 AHCYL2Q96HN2 611 aaKnown RBP4.69□□□□□ -1.66
TRAV40-201ENST00000390467 GREM2Q9H772 168 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 RBM12Q9NTZ6 932 aaKnown RBP4.69□□□□□ -1.66
TRAV40-201ENST00000390467 DNAJC28Q9NX36 388 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 SYBUQ9NX95 663 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 PACSIN3Q9UKS6 424 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 SIK3Q9Y2K2 1263 aa4.69□□□□□ -1.66
TRAV40-201ENST00000390467 SPDEFO95238 335 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 ELANEP08246 267 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 SNRPA1P09661 255 aaKnown RBP4.68□□□□□ -1.66
TRAV40-201ENST00000390467 DDX6P26196 483 aaKnown RBP eCLIP4.68□□□□□ -1.66
TRAV40-201ENST00000390467 PCSK1P29120 753 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 CNGA1P29973 690 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 MCAMP43121 646 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 MALLQ13021 153 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 SP140Q13342 867 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 SPATS2Q86XZ4 545 aaKnown RBP4.68□□□□□ -1.66
TRAV40-201ENST00000390467 OR56A1Q8NGH5 318 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 OR2I1PQ8NGU4 316 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 STON2Q8WXE9 905 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 CRAMP1Q96RY5 1269 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 UHRF1Q96T88 793 aaPredicted RBP4.68□□□□□ -1.66
TRAV40-201ENST00000390467 ZSWIM1Q9BR11 485 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 MRI1Q9BV20 369 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 TOR3AQ9H497 397 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 KLHL11Q9NVR0 708 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 FPGT-TNNI3KV9GXZ4 949 aa4.68□□□□□ -1.66
TRAV40-201ENST00000390467 PRSS23O95084 383 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 CFIP05156 583 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 SPATA31D3P0C874 917 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 RAP2AP10114 183 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 MTHFD2P13995 350 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 TYRP1P17643 537 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 GUCY1B3Q02153 619 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 MGAT2Q10469 447 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 SCAPQ12770 1279 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 NOMO1Q15155 1222 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 ANO4Q32M45 955 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 SPATA31D4Q6ZUB0 917 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 MED25Q71SY5 747 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 RHOT2Q8IXI1 618 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 CMTR2Q8IYT2 770 aaKnown RBP4.67□□□□□ -1.66
TRAV40-201ENST00000390467 WDR66Q8TBY9 1149 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 MYOCQ99972 504 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 PRDM13Q9H4Q3 707 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 SYNPO2LQ9H987 977 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 CYP4F11Q9HBI6 524 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 LANCL2Q9NS86 450 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 FBXO34Q9NWN3 711 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 SLC23A1Q9UHI7 598 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 AJAP1Q9UKB5 411 aaPredicted RBP4.67□□□□□ -1.66
TRAV40-201ENST00000390467 PCDHGA2Q9Y5H1 932 aa4.67□□□□□ -1.66
TRAV40-201ENST00000390467 EPN1Q9Y6I3 576 aaPredicted RBP4.67□□□□□ -1.66
TRAV40-201ENST00000390467 POLR2AP24928 1970 aaKnown RBP4.67□□□□□ -1.66
TRAV40-201ENST00000390467 RHOBTB3O94955 611 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 SLC6A2P23975 617 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 OCA2Q04671 838 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 FOXI1Q12951 378 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 RESTQ13127 1097 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 RRP12Q5JTH9 1297 aaKnown RBP4.66□□□□□ -1.66
TRAV40-201ENST00000390467 B3GNTL1Q67FW5 361 aaPredicted RBP4.66□□□□□ -1.66
TRAV40-201ENST00000390467 DRC7Q8IY82 874 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 ZGPATQ8N5A5 531 aaKnown RBP4.66□□□□□ -1.66
TRAV40-201ENST00000390467 LINC00476Q8WZB0 136 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 FUBP3Q96I24 572 aaKnown RBP eCLIP4.66□□□□□ -1.66
TRAV40-201ENST00000390467 SLC2A13Q96QE2 648 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 ADI1Q9BV57 179 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 ACTL7AQ9Y615 435 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
TRAV40-201ENST00000390467 PIPSLA2A3N6 862 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 K7ESF4 209 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 NUDT3O95989 172 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 AMY1AP04745 511 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 ATP5JP18859 108 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 CLK3P49761 638 aaKnown RBP4.65□□□□□ -1.67
TRAV40-201ENST00000390467 SEC24CP53992 1094 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 PER3P56645 1201 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 TSHZ3Q63HK5 1081 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 ZNF529Q6P280 563 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 OLFML1Q6UWY5 402 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 MAPKAPK5Q8IW41 473 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 LCORLQ8N3X6 602 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 SENP6Q9GZR1 1112 aaPredicted RBP4.65□□□□□ -1.67
TRAV40-201ENST00000390467 ZNF277Q9NRM2 450 aaPredicted RBP4.65□□□□□ -1.67
TRAV40-201ENST00000390467 RUVBL1Q9Y265 456 aaKnown RBP4.65□□□□□ -1.67
TRAV40-201ENST00000390467 GPR45Q9Y5Y3 372 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 AATKQ6ZMQ8 1374 aa4.65□□□□□ -1.67
TRAV40-201ENST00000390467 GPR32O75388 356 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 CDKL5O76039 1030 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 ENDOD1O94919 500 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 EGR2P11161 476 aaPredicted RBP4.64□□□□□ -1.67
TRAV40-201ENST00000390467 IL2RBP14784 551 aa4.64□□□□□ -1.67
TRAV40-201ENST00000390467 GSPT1P15170 499 aaKnown RBP4.64□□□□□ -1.67
TRAV40-201ENST00000390467 CPEP16870 476 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms