RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CCDC194A0A1B0GVG4 234 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 SPDYE3A6NKU9 549 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 BTBD18B2RXH4 712 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 EBAG9O00559 213 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 MEIS2O14770 477 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 STRNO43815 780 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 CUTAO60888 179 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 GJB6O95452 261 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 BPNT1O95861 308 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 FOSP01100 380 aaPredicted RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 CCDC175P0C221 793 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 ACRP10323 421 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 MAOBP27338 520 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 HSD17B4P51659 736 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 RPS6P62753 249 aaKnown RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 IRX1P78414 480 aaPredicted RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 APBA1Q02410 837 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 GHRHRQ02643 423 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 ITIH3Q06033 890 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 AP3B2Q13367 1082 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 SQSTM1Q13501 440 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 BAATQ14032 418 aaPredicted RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 NEDD9Q14511 834 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 KIF22Q14807 665 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 WIPI1Q5MNZ9 446 aaPredicted RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 IQCEQ6IPM2 695 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 USP17L6PQ6QN14 398 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 SLC30A10Q6XR72 485 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 TMC6Q7Z403 805 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 GPR142Q7Z601 462 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 PLEKHH3Q7Z736 793 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 ABRAQ8N0Z2 381 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 DNAJC5GQ8N7S2 189 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 GALNT11Q8NCW6 608 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 SYTL5Q8TDW5 730 aaPredicted RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 AFAP1L1Q8TED9 768 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 CCDC34Q96HJ3 373 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 XPO4Q9C0E2 1151 aaKnown RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 SOX17Q9H6I2 414 aaPredicted RBP8.19□□□□□ -1.1
TRBV28-201ENST00000390400 CYP39A1Q9NYL5 469 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 PCDHA6Q9UN73 950 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 MAPK8IP1Q9UQF2 711 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 PCDHA8Q9Y5H6 950 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 MYH7BA7E2Y1 1941 aa8.19□□□□□ -1.1
TRBV28-201ENST00000390400 ESYT3A0FGR9 886 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 VWA3AA6NCI4 1184 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 SLC15A5A6NIM6 579 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 TNPO2O14787 897 aaKnown RBP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 CHUKO15111 745 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 DDX3YO15523 660 aaKnown RBP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 KIF5CO60282 957 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 FSBPO95073 299 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 HTR3BO95264 441 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 LACTBP83111 547 aaPredicted RBP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 SP3Q02447 781 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 TBX2Q13207 712 aaPredicted RBP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 TRIM14Q14142 442 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 NONOQ15233 471 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 PPP2R5EQ16537 467 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 EMC10Q5UCC4 262 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 SPATC1Q76KD6 591 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 FERMT3Q86UX7 667 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 NOSTRINQ8IVI9 506 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 TBC1D5Q92609 795 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 ACDQ96AP0 544 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 CABS1Q96KC9 395 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 COL25A1Q9BXS0 654 aaPredicted RBP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 ANO3Q9BYT9 981 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 JPH1Q9HDC5 661 aaPredicted RBP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 TMEM260Q9NX78 707 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRBV28-201ENST00000390400 PPME1Q9Y570 386 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 LCTP09848 1927 aa8.18□□□□□ -1.1
TRBV28-201ENST00000390400 ZNF236Q9UL36 1845 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 PLXNA1Q9UIW2 1896 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 MCM3APO60318 1980 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 KIF28PB7ZC32 967 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 PES1O00541 588 aaKnown RBP8.17□□□□□ -1.1
TRBV28-201ENST00000390400 FSCN2O14926 492 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 ADAMTS3O15072 1205 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 PDPK1O15530 556 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 FKTNO75072 461 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 ADAM11O75078 769 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 PGK2P07205 417 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 EPB41P11171 864 aaKnown RBP8.17□□□□□ -1.1
TRBV28-201ENST00000390400 EPXP11678 715 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 NEFHP12036 1026 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 CMA1P23946 247 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 ADORA2AP29274 412 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 PSMC4P43686 418 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 MAP2K3P46734 347 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 CKAP4Q07065 602 aaKnown RBP8.17□□□□□ -1.1
TRBV28-201ENST00000390400 C19orf57Q0VDD7 668 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 PPFIA1Q13136 1202 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 GRB14Q14449 540 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 CRYMQ14894 314 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 NCAPHQ15003 741 aa8.17□□□□□ -1.1
TRBV28-201ENST00000390400 FOXD4L6Q3SYB3 417 aaPredicted RBP8.17□□□□□ -1.1
TRBV28-201ENST00000390400 FOXD4L3Q6VB84 417 aaPredicted RBP8.17□□□□□ -1.1
TRBV28-201ENST00000390400 PIK3AP1Q6ZUJ8 805 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms