RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TSSK1BQ9BXA7 367 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 SENP1Q9P0U3 644 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 RIC1Q4ADV7 1423 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZNF335Q9H4Z2 1342 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 PPEF1O14829 653 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 SGPL1O95470 568 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 DDR1Q08345 913 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 ACCSLQ4AC99 568 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 WDR75Q8IWA0 830 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 C4orf32Q8N8J7 132 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 ARHGEF26Q96DR7 871 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 PGM2Q96G03 612 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 RXFP1Q9HBX9 757 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 AGPAT3Q9NRZ7 376 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 GGA2Q9UJY4 613 aa13.94□□□□□ -0.18
TRAPPC9-201ENST00000389328 A0A0A6YYK5 440 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 OSTNP61366 133 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 MCF2L2Q86YR7 1114 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 CDKL2Q92772 493 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 SMYD2Q9NRG4 433 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 DAGLAQ9Y4D2 1042 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 WDR64B1ANS9 1081 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 FNTAP49354 379 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 ASPHQ12797 758 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 CDO1Q16878 200 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZBTB33Q86T24 672 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 MAP7D3Q8IWC1 876 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 ATP6V0A1Q93050 837 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 TTYH3Q9C0H2 523 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 TLR2O60603 784 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 TNNC2P02585 160 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 GNA15P30679 374 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 ITPK1Q13572 414 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 COG2Q14746 738 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 RINT1Q6NUQ1 792 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 PURBQ96QR8 312 aaKnown RBP13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 SIGLEC1Q9BZZ2 1709 aa13.93□□□□□ -0.18
TRAPPC9-201ENST00000389328 H0YCG3 227 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 PPFIA2O75334 1257 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 GNAT1P11488 350 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 YWHAEP62258 255 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 RABGAP1LQ5R372 815 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 ANKRD20A2Q5SQ80 823 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 ANKRD20A1Q5TYW2 823 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 KCNV1Q6PIU1 500 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 RASSF3Q86WH2 238 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 RNF168Q8IYW5 571 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 JDP2Q8WYK2 163 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 KRT35Q92764 455 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 SLC35C1Q96A29 364 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 SCYL1Q96KG9 808 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 THTPAQ9BU02 230 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 CTNNAL1Q9UBT7 734 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 B2RBV5 119 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 CES2O00748 559 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 CAPN9O14815 690 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 SNX3O60493 162 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 ALDH18A1P54886 795 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 DBN1Q16643 649 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 SYDE1Q6ZW31 735 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 NLRP9Q7RTR0 991 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 NUDCD3Q8IVD9 361 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 PI4K2AQ9BTU6 479 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 METTL5Q9NRN9 209 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 SYNJ2BP-COX16A0A087WUM0 186 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 PYGMP11217 842 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 DYNC1I2Q13409 638 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 CEP55Q53EZ4 464 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 EAPPQ56P03 285 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 PCGF5Q86SE9 256 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 PPWD1Q96BP3 646 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 MKNK1Q9BUB5 465 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 NEUROG2Q9H2A3 272 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 COX16Q9P0S2 106 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 KCNG1Q9UIX4 513 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 NAALADL1Q9UQQ1 740 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 RPS6KA4O75676 772 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 ZCCHC18P0CG32 403 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 KRT4P19013 534 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 THOC5Q13769 683 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 MMTAG2Q9BU76 263 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 TRIM33Q9UPN9 1127 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 APOBEC2Q9Y235 224 aaKnown RBP13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 HEY1Q9Y5J3 304 aa13.92□□□□□ -0.18
TRAPPC9-201ENST00000389328 O00370 1275 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 NOP56O00567 594 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 TTC4O95801 387 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 P4HBP07237 508 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 CASP5P51878 434 aa13.91□□□□□ -0.18
TRAPPC9-201ENST00000389328 KCNA1Q09470 495 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms