RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 CDC5LQ99459 802 aaKnown RBP2.16□□□□□ -2.06
SNORA40-201ENST00000388090 CDC6Q99741 560 aa2.16□□□□□ -2.06
SNORA40-201ENST00000388090 QTRT1Q9BXR0 403 aaKnown RBP2.16□□□□□ -2.06
SNORA40-201ENST00000388090 TGIF2Q9GZN2 237 aa2.16□□□□□ -2.06
SNORA40-201ENST00000388090 KCNE5Q9UJ90 142 aa2.16□□□□□ -2.06
SNORA40-201ENST00000388090 GAS8-AS1O95177 125 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 NPTXRO95502 500 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 CD1AP06126 327 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 CKBP12277 381 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 SREBF1P36956 1147 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 UBE3CQ15386 1083 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 TMEM119Q4V9L6 283 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 DGKKQ5KSL6 1271 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 ATXN7L2Q5T6C5 722 aaPredicted RBP2.15□□□□□ -2.07
SNORA40-201ENST00000388090 KAZNQ674X7 775 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 SLC18B1Q6NT16 456 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 ESRP1Q6NXG1 681 aaKnown RBP2.15□□□□□ -2.07
SNORA40-201ENST00000388090 ANKS3Q6ZW76 656 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 SPATC1Q76KD6 591 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 PHYKPLQ8IUZ5 450 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 ACRBPQ8NEB7 543 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 FUBP3Q96I24 572 aaKnown RBP eCLIP2.15□□□□□ -2.07
SNORA40-201ENST00000388090 VPS16Q9H269 839 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 POFUT1Q9H488 388 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 RNPEPQ9H4A4 650 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 NCOA5Q9HCD5 579 aaKnown RBP2.15□□□□□ -2.07
SNORA40-201ENST00000388090 PCDHB6Q9Y5E3 794 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 PNPLA7Q6ZV29 1317 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 MYPNQ86TC9 1320 aa2.15□□□□□ -2.07
SNORA40-201ENST00000388090 TCF20Q9UGU0 1960 aaKnown RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 AATKQ6ZMQ8 1374 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 MYMKA6NI61 221 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 PRSS44E7EML9 344 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 YY2O15391 372 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 MPPED1O15442 326 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 ORC4O43929 436 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 ITGA10O75578 1167 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 PCDH8O95206 1070 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 APOL3O95236 402 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 CERS1P27544 350 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 THBS3P49746 956 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 NANOS2P60321 138 aaKnown RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 HSD11B2P80365 405 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 SF3B3Q15393 1217 aaKnown RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 ARHGAP44Q17R89 818 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 TIGD7Q6NT04 549 aaPredicted RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 VWA1Q6PCB0 445 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 SLC2A7Q6PXP3 512 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 MED25Q71SY5 747 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 C7orf31Q8N865 590 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 KIAA1958Q8N8K9 716 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 ZBTB38Q8NAP3 1195 aaPredicted RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 MDM1Q8TC05 714 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 FERMT2Q96AC1 680 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 MAGEB10Q96LZ2 347 aaPredicted RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 SH2D3AQ9BRG2 576 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 TMEM79Q9BSE2 394 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 TMEM260Q9NX78 707 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 TUBA8Q9NY65 449 aaPredicted RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 SERGEFQ9UGK8 458 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 USP25Q9UHP3 1055 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 PROCRQ9UNN8 238 aa2.14□□□□□ -2.07
SNORA40-201ENST00000388090 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.14□□□□□ -2.07
SNORA40-201ENST00000388090 TCRBV16S1A1N1A0A5B0 115 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 PPP6CO00743 305 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 PJA2O43164 708 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 KLF4O43474 513 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 ERN1O75460 977 aaKnown RBP2.13□□□□□ -2.07
SNORA40-201ENST00000388090 GPANK1O95872 356 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 MCAMP43121 646 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 CLRN1P58418 232 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 RABEP1Q15276 862 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 GEN1Q17RS7 908 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 CEP78Q5JTW2 689 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 CDYL2Q8N8U2 506 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 TFAP2BQ92481 460 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 CTAGE1Q96RT6 745 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 DHRS4Q9BTZ2 278 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 PCIF1Q9H4Z3 704 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 CAPN10Q9HC96 672 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 NDOR1Q9UHB4 597 aa2.13□□□□□ -2.07
SNORA40-201ENST00000388090 MRPS23Q9Y3D9 190 aaKnown RBP2.13□□□□□ -2.07
SNORA40-201ENST00000388090 LINC00473A8K010 186 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 GTPBP1O00178 669 aaKnown RBP2.12□□□□□ -2.07
SNORA40-201ENST00000388090 ELL2O00472 640 aaPredicted RBP2.12□□□□□ -2.07
SNORA40-201ENST00000388090 PROM1O43490 865 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 FGRP09769 529 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 GCSHP23434 173 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 MMP13P45452 471 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 FLT3LGP49771 235 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 ERV3-1Q14264 604 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 NBPF8Q3BBV2 869 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 TRIM61Q5EBN2 209 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 PRAMEF14Q5SWL7 426 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 SUMO4Q6EEV6 95 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 GSG1LQ6UXU4 331 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 IRF2BP2Q7Z5L9 587 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 COLGALT2Q8IYK4 626 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 NSMCE1Q8WV22 266 aa2.12□□□□□ -2.07
SNORA40-201ENST00000388090 IPO9Q96P70 1041 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms