RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 RIPK3Q9Y572 518 aa20.07■□□□□ 0.8
CSPG5-202ENST00000383738 AFDNP55196 1824 aaKnown RBP20.07■□□□□ 0.8
CSPG5-202ENST00000383738 EFCAB12Q6NXP0 572 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 LRRC34Q8IZ02 419 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 RPUSD2Q8IZ73 545 aaKnown RBP20.06■□□□□ 0.8
CSPG5-202ENST00000383738 ANKS1AQ92625 1134 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 COPS5Q92905 334 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 FAM84AQ96KN4 292 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 ALG13Q9NP73 1137 aaKnown RBP20.06■□□□□ 0.8
CSPG5-202ENST00000383738 NGRNQ9NPE2 291 aaKnown RBP20.06■□□□□ 0.8
CSPG5-202ENST00000383738 IGF2BP3O00425 579 aaKnown RBP eCLIP20.06■□□□□ 0.8
CSPG5-202ENST00000383738 SPAG7O75391 227 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 RNF8O76064 485 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 BRAFP15056 766 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 ABTB1Q969K4 478 aaPredicted RBP20.06■□□□□ 0.8
CSPG5-202ENST00000383738 COL14A1Q05707 1796 aaKnown RBP20.06■□□□□ 0.8
CSPG5-202ENST00000383738 PDHXO00330 501 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 PRKCBP05771 671 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 SARSP49591 514 aaKnown RBP20.06■□□□□ 0.8
CSPG5-202ENST00000383738 CREG2Q8IUH2 290 aa20.06■□□□□ 0.8
CSPG5-202ENST00000383738 LUC7L3O95232 432 aaKnown RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 CA4P22748 312 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 PHKA2P46019 1235 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 MDM2Q00987 491 aaPredicted RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 SNRNP35Q16560 246 aaKnown RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 ZNF699Q32M78 642 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 PDXDC1Q6P996 788 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 CBWD2Q8IUF1 395 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 RAB3IL1Q8TBN0 382 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 SCFD2Q8WU76 684 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 FAM167AQ96KS9 214 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 PIN4Q9Y237 131 aaKnown RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 REXO2Q9Y3B8 237 aaKnown RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 PDXKO00764 312 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 ATP9AO75110 1047 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 DSG3P32926 999 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 NLRP11P59045 1033 aaKnown RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 GIT2Q14161 759 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 GLRA4Q5JXX5 417 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 FAM117BQ6P1L5 589 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 BZW2Q9Y6E2 419 aaKnown RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 A0A0G2JND7 137 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 SLFN12LQ6IEE8 588 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 RAET1EQ8TD07 263 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 HAS1Q92839 578 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 IQCDQ96DY2 449 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 SNX25Q9H3E2 840 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 FTLP02792 175 aaPredicted RBP20.05■□□□□ 0.8
CSPG5-202ENST00000383738 KRT81Q14533 505 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 PGM5Q15124 567 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 KRT39Q6A163 491 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 KIAA0895Q8NCT3 520 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 FAM118BQ9BPY3 351 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 CEP72Q9P209 647 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 SEL1LQ9UBV2 794 aa20.05■□□□□ 0.8
CSPG5-202ENST00000383738 CCT8L1PA6NM43 557 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 PFDN1O60925 122 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 CIB2O75838 187 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 ITGA4P13612 1032 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 ORC1Q13415 861 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 KDM7AQ6ZMT4 941 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 MIPOL1Q8TD10 442 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 AFG1LQ8WV93 481 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 NUDCD1Q96RS6 583 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 BLOC1S4Q9NUP1 217 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 SEPT10Q9P0V9 454 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 CACNA1FO60840 1977 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.04■□□□□ 0.8
CSPG5-202ENST00000383738 LGR5O75473 907 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 ARL1P40616 181 aaPredicted RBP20.04■□□□□ 0.8
CSPG5-202ENST00000383738 SLC29A2Q14542 456 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 SGO2Q562F6 1265 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 PRAMEF19Q5SWL8 479 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 TRPM8Q7Z2W7 1104 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 PRCCQ92733 491 aaPredicted RBP20.04■□□□□ 0.8
CSPG5-202ENST00000383738 PARK7Q99497 189 aaKnown RBP20.04■□□□□ 0.8
CSPG5-202ENST00000383738 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.04■□□□□ 0.8
CSPG5-202ENST00000383738 ANAPC7Q9UJX3 599 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 CAND2O75155 1236 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 SLITRK3O94933 977 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 ZNF286BP0CG31 522 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 PLS3P13797 630 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 AARSP49588 968 aaKnown RBP eCLIP20.04■□□□□ 0.8
CSPG5-202ENST00000383738 KIZQ2M2Z5 673 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 ADAM22Q9P0K1 906 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 TTC7AQ9ULT0 858 aaPredicted RBP20.04■□□□□ 0.8
CSPG5-202ENST00000383738 PASKQ96RG2 1323 aa20.04■□□□□ 0.8
CSPG5-202ENST00000383738 VTNP04004 478 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 JAG1P78504 1218 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 SATB1Q01826 763 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 FUKQ8N0W3 1084 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 MRPL4Q9BYD3 311 aaKnown RBP20.03■□□□□ 0.8
CSPG5-202ENST00000383738 ZWILCHQ9H900 591 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 CNOT8Q9UFF9 292 aaKnown RBP20.03■□□□□ 0.8
CSPG5-202ENST00000383738 PCSK1NQ9UHG2 260 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 WEE2P0C1S8 567 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 UCHL3P15374 230 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 DNAJC24Q6P3W2 148 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 NME8Q8N427 588 aa20.03■□□□□ 0.8
CSPG5-202ENST00000383738 CHST13Q8NET6 341 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms