RNA–Protein interactions for RNA: ENST00000382275.5

CDH18-202, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-202ENST00000382275 LRRC43Q8N309 656 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 ZNF668Q96K58 619 aaPredicted RBP10.78□□□□□ -0.68
CDH18-202ENST00000382275 MED15Q96RN5 788 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 RPF1Q9H9Y2 349 aaKnown RBP10.78□□□□□ -0.68
CDH18-202ENST00000382275 NLRC5Q86WI3 1866 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 P4HA2O15460 535 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 ATP2A2P16615 1042 aaKnown RBP10.78□□□□□ -0.68
CDH18-202ENST00000382275 DPCR1Q3MIW9 517 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 NOMO2Q5JPE7 1267 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 GLB1LQ6UWU2 654 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 C15orf39Q6ZRI6 1047 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 URGCPQ8TCY9 931 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
CDH18-202ENST00000382275 RNPC3Q96LT9 517 aaKnown RBP10.78□□□□□ -0.68
CDH18-202ENST00000382275 TRIM6Q9C030 488 aaPredicted RBP10.78□□□□□ -0.68
CDH18-202ENST00000382275 NXF3Q9H4D5 531 aaKnown RBP10.78□□□□□ -0.68
CDH18-202ENST00000382275 LRFN2Q9ULH4 789 aa10.78□□□□□ -0.68
CDH18-202ENST00000382275 RECQL4O94761 1208 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 RB1P06400 928 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 DEFB103AP81534 67 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 SNRNP35Q16560 246 aaKnown RBP10.77□□□□□ -0.68
CDH18-202ENST00000382275 CDKAL1Q5VV42 579 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 LRSAM1Q6UWE0 723 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 FAM114A1Q8IWE2 563 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 CWH43Q9H720 699 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 VRTNQ9H8Y1 702 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 FRMD4BQ9Y2L6 1034 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 DAAM1Q9Y4D1 1078 aa10.77□□□□□ -0.68
CDH18-202ENST00000382275 ARL5CA6NH57 179 aa10.77□□□□□ -0.69
CDH18-202ENST00000382275 PMS1P54277 932 aaKnown RBP10.77□□□□□ -0.69
CDH18-202ENST00000382275 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.69
CDH18-202ENST00000382275 CGRRF1Q99675 332 aa10.77□□□□□ -0.69
CDH18-202ENST00000382275 GZF1Q9H116 711 aaPredicted RBP10.77□□□□□ -0.69
CDH18-202ENST00000382275 CXXC1Q9P0U4 656 aaPredicted RBP10.77□□□□□ -0.69
CDH18-202ENST00000382275 LZTS1Q9Y250 596 aa10.77□□□□□ -0.69
CDH18-202ENST00000382275 ANO9A1A5B4 782 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 LRRC10BA6NIK2 292 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 SMTNL1A8MU46 457 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 PTGESO14684 152 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 NR2F2P24468 414 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 AARSP49588 968 aaKnown RBP eCLIP10.76□□□□□ -0.69
CDH18-202ENST00000382275 ADAM9Q13443 819 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 NELFCDQ8IXH7 590 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 CXorf38Q8TB03 319 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 SNTG2Q9NY99 539 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 UBQLN1Q9UMX0 589 aaKnown RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 BRCA2P51587 3418 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 LAG3P18627 525 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 EEF1GP26641 437 aaKnown RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 OTOP2Q7RTS6 562 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 LIMS2Q7Z4I7 341 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 COLGALT2Q8IYK4 626 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 SMYD4Q8IYR2 804 aaPredicted RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 RNF168Q8IYW5 571 aaPredicted RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 PARD3BQ8TEW8 1205 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 CACTINQ8WUQ7 758 aaKnown RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 ERCC4Q92889 916 aaPredicted RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 COQ4Q9Y3A0 265 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 SMIM28A0A1B0GU29 152 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 EPB41P11171 864 aaKnown RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 ZNF18P17022 549 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 UBE3AQ05086 875 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 TUSC3Q13454 348 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 NCAPHQ15003 741 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 TCHPQ9BT92 498 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 RBAKQ9NYW8 714 aaPredicted RBP10.76□□□□□ -0.69
CDH18-202ENST00000382275 ANKFY1Q9P2R3 1169 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 ITGA11Q9UKX5 1188 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 CTNND2Q9UQB3 1225 aa10.76□□□□□ -0.69
CDH18-202ENST00000382275 GTPBP10A4D1E9 387 aaKnown RBP10.75□□□□□ -0.69
CDH18-202ENST00000382275 AKAP3O75969 853 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 THP07101 528 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 ERVK-21P61565 698 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 MYL5Q02045 173 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 SPAG1Q07617 926 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 IQCB1Q15051 598 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 TMEM132AQ24JP5 1023 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 TRIM59Q8IWR1 403 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 LRRC52Q8N7C0 313 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 TAF4BQ92750 862 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 LACTBL1A8MY62 500 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 TISP43B9A030 160 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 BIN1O00499 593 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 N4BP1O75113 896 aaKnown RBP10.75□□□□□ -0.69
CDH18-202ENST00000382275 ATICP31939 592 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 BFSP1Q12934 665 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 IRF2BP1Q8IU81 584 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 FAM186BQ8IYM0 893 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 FAM213AQ9BRX8 229 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 OXCT2Q9BYC2 517 aaPredicted RBP10.75□□□□□ -0.69
CDH18-202ENST00000382275 LMAN2LQ9H0V9 348 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 TBC1D13Q9NVG8 400 aa10.75□□□□□ -0.69
CDH18-202ENST00000382275 EXOC3O60645 756 aa10.74□□□□□ -0.69
CDH18-202ENST00000382275 POU3F3P20264 500 aaPredicted RBP10.74□□□□□ -0.69
CDH18-202ENST00000382275 PPM1AP35813 382 aa10.74□□□□□ -0.69
CDH18-202ENST00000382275 PNPLA4P41247 253 aa10.74□□□□□ -0.69
CDH18-202ENST00000382275 TNFSF9P41273 254 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms