RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 ERAP2Q6P179 960 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CCDC137Q6PK04 289 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 OR8H2Q8N162 312 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 USP33Q8TEY7 942 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 MRPL39Q9NYK5 338 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 DCDC2Q9UHG0 476 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 UHRF1BP1LA0JNW5 1464 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 USP17L3A6NCW0 530 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 USP17L4A6NCW7 530 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 MFAP3LO75121 409 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 ALDH1A1P00352 501 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 UBTFL6P0CB48 400 aaPredicted RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 SLFNL1Q499Z3 407 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.17□□□□□ -1.42
RFX3-204ENST00000382004 USP17L1Q7RTZ2 530 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 JADE3Q92613 823 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 YEATS2Q9ULM3 1422 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 XDHP47989 1333 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 RSPH10B2B2RC85 870 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 TEX28O15482 410 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 RSPH10BP0C881 870 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 FOSL2P15408 326 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 MTMR1Q13613 665 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 TRIM16LQ309B1 348 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 C16orf89Q6UX73 402 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 SH3TC2Q8TF17 1288 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 SPATA16Q9BXB7 569 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 DDX47Q9H0S4 455 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 ARHGEF38Q9NXL2 777 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 DDX56Q9NY93 547 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 A8MXQ7 604 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 ATP6V1B1P15313 513 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 MZF1P28698 734 aaPredicted RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 HSPA9P38646 679 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 TPI1P60174 286 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 OMA1Q96E52 524 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 C19orf60Q96EN9 201 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 DDX50Q9BQ39 737 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 APOL5Q9BWW9 433 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 KLHL25Q9H0H3 589 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 PCDHB8Q9UN66 801 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 EIF4G3O43432 1585 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 PCF11O94913 1555 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 POTEFA5A3E0 1075 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 F8W810 466 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CDC16Q13042 620 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 LAMC2Q13753 1193 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 RNASE11Q8TAA1 199 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 CNDP1Q96KN2 507 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CEP72Q9P209 647 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 PNMA3Q9UL41 463 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 CDYLQ9Y232 598 aa6.17□□□□□ -1.42
RFX3-204ENST00000382004 SRPRBQ9Y5M8 271 aaKnown RBP6.17□□□□□ -1.42
RFX3-204ENST00000382004 LOC102724159A0A0B4J2E5 919 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PWP2Q15269 919 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 SLC44A2Q8IWA5 706 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 ZNF614Q8N883 585 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PCYOX1LQ8NBM8 494 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 DTNBP1Q96EV8 351 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 OSBPL9Q96SU4 736 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 MUC3BQ9H195 1237 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CCDC134Q9H6E4 229 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 DENND4BO75064 1496 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 IFT140Q96RY7 1462 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PNMA6FA0A0J9YX94 578 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 LRRIQ3A6PVS8 624 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 ATP6V1C1P21283 382 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 SOX6P35712 828 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 SULT1E1P49888 294 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 VAMP7P51809 220 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 KLC1Q07866 573 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CYLC2Q14093 348 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 FUT11Q495W5 492 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 UNC45BQ8IWX7 931 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CYFIP2Q96F07 1278 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 MAGEB10Q96LZ2 347 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 TASP1Q9H6P5 420 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 KDM5BQ9UGL1 1544 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CYP2D7A0A087X1C5 515 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 NR3C1P04150 777 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 APRTP07741 180 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 KRT16P08779 473 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 MYL2P10916 166 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CYP19A1P11511 503 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 PLA2G4AP47712 749 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 HSD17B4P51659 736 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PLIN5Q00G26 463 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 USP10Q14694 798 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 PTRHD1Q6GMV3 140 aaKnown RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 GRAMD1AQ96CP6 724 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 KIF12Q96FN5 646 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 TRABDQ9H4I3 376 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 TAF1DQ9H5J8 278 aaPredicted RBP6.16□□□□□ -1.42
RFX3-204ENST00000382004 SYBUQ9NX95 663 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 A0A1W2PP64 1363 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 USP1O94782 785 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 ALBP02768 609 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 PGK2P07205 417 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 NCKAP1LP55160 1127 aa6.16□□□□□ -1.42
RFX3-204ENST00000382004 CDK17Q00537 523 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms