RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ZC3H3Q8IXZ2 948 aaKnown RBP16.83■□□□□ 0.28
PDGFB-202ENST00000381551 CMTR2Q8IYT2 770 aaKnown RBP16.83■□□□□ 0.28
PDGFB-202ENST00000381551 RDH13Q8NBN7 331 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 SP7Q8TDD2 431 aaPredicted RBP16.83■□□□□ 0.28
PDGFB-202ENST00000381551 RSPH1Q8WYR4 309 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
PDGFB-202ENST00000381551 ANO10Q9NW15 660 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 PCDHA11Q9Y5I1 949 aa16.83■□□□□ 0.28
PDGFB-202ENST00000381551 SMIM28A0A1B0GU29 152 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 LACTBL1A8MY62 500 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 PTGESO14684 152 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 CETN3O15182 167 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 POMCP01189 267 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 MYOGP15173 224 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 KCNE1P15382 129 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 PBX2P40425 430 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 CASP4P49662 377 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 BTG3Q14201 252 aaPredicted RBP16.82■□□□□ 0.28
PDGFB-202ENST00000381551 PAN2Q504Q3 1202 aaKnown RBP16.82■□□□□ 0.28
PDGFB-202ENST00000381551 CD302Q8IX05 232 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 NOC3LQ8WTT2 800 aaKnown RBP16.82■□□□□ 0.28
PDGFB-202ENST00000381551 EEF2KMTQ96G04 330 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 SNX27Q96L92 541 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 MFSD14AQ96MC6 490 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 ZMAT2Q96NC0 199 aaKnown RBP16.82■□□□□ 0.28
PDGFB-202ENST00000381551 FUCA2Q9BTY2 467 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 PBX4Q9BYU1 374 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 ASB7Q9H672 318 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 TBC1D13Q9NVG8 400 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 CNTN3Q9P232 1028 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 INPP5FQ9Y2H2 1132 aa16.82■□□□□ 0.28
PDGFB-202ENST00000381551 COL4A6Q14031 1691 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 LCHNA4D1U4 455 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 AKAP3O75969 853 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 SCNN1GP51170 649 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 SMAD3P84022 425 aaKnown RBP16.81■□□□□ 0.28
PDGFB-202ENST00000381551 HSP90AA2PQ14568 343 aaPredicted RBP16.81■□□□□ 0.28
PDGFB-202ENST00000381551 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 URGCPQ8TCY9 931 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
PDGFB-202ENST00000381551 RBAKQ9NYW8 714 aaPredicted RBP16.81■□□□□ 0.28
PDGFB-202ENST00000381551 PLAGL2Q9UPG8 496 aa16.81■□□□□ 0.28
PDGFB-202ENST00000381551 YBX2Q9Y2T7 364 aaKnown RBP16.81■□□□□ 0.28
PDGFB-202ENST00000381551 FNDC1Q4ZHG4 1894 aaPredicted RBP16.81■□□□□ 0.28
PDGFB-202ENST00000381551 MAPK13O15264 365 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 DDHD2O94830 711 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 IL18RAPO95256 599 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 THP07101 528 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 CCDC192P0DO97 292 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 PSMC2P35998 433 aaKnown RBP16.8■□□□□ 0.28
PDGFB-202ENST00000381551 WNT7BP56706 349 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
PDGFB-202ENST00000381551 PPP2R3AQ06190 1150 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 SPAG1Q07617 926 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 CYP24A1Q07973 514 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 NAB2Q15742 525 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 RAB30Q15771 203 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 ZBTB6Q15916 424 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 ZNF280BQ86YH2 543 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 FIBCD1Q8N539 461 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 FAM212AQ96EL1 285 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 PPP1R10Q96QC0 940 aaKnown RBP16.8■□□□□ 0.28
PDGFB-202ENST00000381551 RPS6KC1Q96S38 1066 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 TSPAN18Q96SJ8 248 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 CWH43Q9H720 699 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 MSRAQ9UJ68 235 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 FRMD4BQ9Y2L6 1034 aa16.8■□□□□ 0.28
PDGFB-202ENST00000381551 TRIP11Q15643 1979 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 CA3P07451 260 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 GRIK3Q13003 919 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 SURF1Q15526 300 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 GLRA4Q5JXX5 417 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 C11orf57Q6ZUT1 292 aaPredicted RBP16.79■□□□□ 0.28
PDGFB-202ENST00000381551 FILIP1Q7Z7B0 1213 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 LRRC43Q8N309 656 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 CSGALNACT2Q8N6G5 542 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 BORCS6Q96GS4 357 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 CEP63Q96MT8 703 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 MKNK1Q9BUB5 465 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 SRRTQ9BXP5 876 aaKnown RBP16.79■□□□□ 0.28
PDGFB-202ENST00000381551 DNAJC25Q9H1X3 360 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 PDE11AQ9HCR9 933 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 HCSTQ9UBK5 93 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 MRPL42Q9Y6G3 142 aaKnown RBP16.79■□□□□ 0.28
PDGFB-202ENST00000381551 CITO14578 2027 aa16.79■□□□□ 0.28
PDGFB-202ENST00000381551 LINC01553A4QN01 128 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 B4GALT3O60512 393 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 ARHGEF15O94989 841 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 LINC00271P0C7V0 271 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 RNASELQ05823 741 aaKnown RBP16.78■□□□□ 0.28
PDGFB-202ENST00000381551 DSC1Q08554 894 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 PSMD6Q15008 389 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 ANO6Q4KMQ2 910 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 JADE1Q6IE81 842 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 COLGALT2Q8IYK4 626 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 ENOX1Q8TC92 643 aaKnown RBP16.78■□□□□ 0.28
PDGFB-202ENST00000381551 PLEKHO2Q8TD55 490 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 PARD3BQ8TEW8 1205 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms