RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 ARHGAP10A1A4S6 786 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 GPR182O15218 404 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 GAS2O43903 313 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 MGEA5O60502 916 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 ZC3H11AO75152 810 aaKnown RBP eCLIP5.89□□□□□ -1.47
GEN1-202ENST00000381254 KLRC2P26717 231 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 MYL7Q01449 175 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 PNOCQ13519 176 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 SHHQ15465 462 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 ARMCX5Q6P1M9 558 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 FAM43BQ6ZT52 329 aaPredicted RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 EFL1Q7Z2Z2 1120 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 TRAPPC11Q7Z392 1133 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 RAB44Q7Z6P3 723 aaPredicted RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 SLC35F6Q8N357 371 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 SCG3Q8WXD2 468 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 PAGE5Q96GU1 130 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 PARD6BQ9BYG5 372 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 FAM207AQ9NSI2 230 aaPredicted RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 ABCF3Q9NUQ8 709 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 DNAJC17Q9NVM6 304 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 NSMCE4AQ9NXX6 385 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 VPS54Q9P1Q0 977 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 SCOCQ9UIL1 159 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 KPNA7A9QM74 516 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 RHOBTB3O94955 611 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 DSG3P32926 999 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 DDIT3P35638 169 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 CCT5P48643 541 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 LIG4P49917 911 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 STX1BP61266 288 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 SPARCL1Q14515 664 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 LRRC41Q15345 812 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 ICE2Q659A1 982 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 CCDC149Q6ZUS6 474 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 RASGRP2Q7LDG7 609 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 WDR75Q8IWA0 830 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 NME8Q8N427 588 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 RFFLQ8WZ73 363 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 ANKRD7Q92527 254 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 C7orf25Q9BPX7 421 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 SEMA4AQ9H3S1 761 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 UBN1Q9NPG3 1134 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 THG1LQ9NWX6 298 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 SALL3Q9BXA9 1300 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 GTPBP10A4D1E9 387 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 FAM196BA6NMK8 535 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 MTSS1O43312 755 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 TADA3O75528 432 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 PAX3P23760 479 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 CLCN6P51797 869 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 TPD52P55327 224 aaPredicted RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 ARL4CP56559 192 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 MAGOHBQ96A72 148 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 AGXT2Q9BYV1 514 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 FAF1Q9UNN5 650 aaPredicted RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 CAPN7Q9Y6W3 813 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 ASTN2O75129 1339 aaPredicted RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 TJP3O95049 919 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 INHBAP08476 426 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 EFNA5P52803 228 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 MYO1EQ12965 1108 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 KRT24Q2M2I5 525 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 PAN2Q504Q3 1202 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 AGGF1Q8N302 714 aaeCLIP5.89□□□□□ -1.47
GEN1-202ENST00000381254 GPATCH11Q8N954 259 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 SH3RF3Q8TEJ3 882 aaPredicted RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 PRPF31Q8WWY3 499 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 KLHL29Q96CT2 875 aa5.89□□□□□ -1.47
GEN1-202ENST00000381254 CACYBPQ9HB71 228 aaKnown RBP5.89□□□□□ -1.47
GEN1-202ENST00000381254 RPS6KA5O75582 802 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 GSTA1P08263 222 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 TMEM191BP0C7N4 346 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 SERPINB9P50453 376 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 ZNF135P52742 658 aaPredicted RBP5.88□□□□□ -1.47
GEN1-202ENST00000381254 NAA20P61599 178 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 PFKPQ01813 784 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 DPCR1Q3MIW9 517 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 DAB2IPQ5VWQ8 1189 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 ZNF662Q6ZS27 426 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 EFHBQ8N7U6 833 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 MAGEB5Q9BZ81 275 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 APOBEC2Q9Y235 224 aaKnown RBP5.88□□□□□ -1.47
GEN1-202ENST00000381254 A0A1W2PQ45 241 aaPredicted RBP5.88□□□□□ -1.47
GEN1-202ENST00000381254 A0A1W2PQY0 241 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 MCF2LO15068 1137 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 EGFRP00533 1210 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 LAG3P18627 525 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 ZNF449Q6P9G9 518 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 GLB1LQ6UWU2 654 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 LRRC47Q8N1G4 583 aaKnown RBP5.88□□□□□ -1.47
GEN1-202ENST00000381254 BANK1Q8NDB2 785 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 ZNF558Q96NG5 402 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 NAT9Q9BTE0 207 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 VPS37BQ9H9H4 285 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 SPATA6Q9NWH7 488 aaPredicted RBP5.88□□□□□ -1.47
GEN1-202ENST00000381254 PKD2L1Q9P0L9 805 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 PRKAG3Q9UGI9 489 aa5.88□□□□□ -1.47
GEN1-202ENST00000381254 SNUPNO95149 360 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms