RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 COL4A3BPQ9Y5P4 624 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 ARAP2Q8WZ64 1704 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 GOLGA8RI6L899 631 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 TOM1L1O75674 476 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 OCRLQ01968 901 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 LRMPQ12912 555 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 CNGA3Q16281 694 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 REXO1Q8N1G1 1221 aaKnown RBP5.15□□□□□ -1.58
PTPRD-203ENST00000381196 CXorf38Q8TB03 319 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 HPS1Q92902 700 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 EME1Q96AY2 570 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 AP1M1Q9BXS5 423 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 RANBP17Q9H2T7 1088 aaKnown RBP5.15□□□□□ -1.58
PTPRD-203ENST00000381196 RAB20Q9NX57 234 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 MEIS1O00470 390 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 MYL3P08590 195 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 SLC27A3Q5K4L6 730 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 TTC30AQ86WT1 665 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 LEMD2Q8NC56 503 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 PITPNM3Q9BZ71 974 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 VPS33BQ9H267 617 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 PPANQ9NQ55 473 aaKnown RBP5.15□□□□□ -1.58
PTPRD-203ENST00000381196 AASDHPPTQ9NRN7 309 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 NRBP1Q9UHY1 535 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 HACL1Q9UJ83 578 aa5.15□□□□□ -1.58
PTPRD-203ENST00000381196 DBNLQ9UJU6 430 aaKnown RBP5.15□□□□□ -1.58
PTPRD-203ENST00000381196 MAST2Q6P0Q8 1798 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 TNNC2P02585 160 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 NUDT17P0C025 328 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 PTPN4P29074 926 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 HIC1Q14526 733 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 SLFN13Q68D06 897 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 MFSD5Q6N075 450 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 DNAJB7Q7Z6W7 309 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 TMIEQ8NEW7 156 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 PHACTR3Q96KR7 559 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 XAB2Q9HCS7 855 aaKnown RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 C6orf203Q9P0P8 240 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 SLC8A2Q9UPR5 921 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 DMTF1Q9Y222 760 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 CARD8Q9Y2G2 431 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 SPAG17Q6Q759 2223 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 RASA4BC9J798 803 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 ANGPT2O15123 496 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 RASA4O43374 803 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 ESRRAP11474 423 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 PHKG2P15735 406 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 PTPREP23469 700 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 MYBPC2Q14324 1141 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 RNF43Q68DV7 783 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 CWF19L1Q69YN2 538 aaKnown RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 SEC16BQ96JE7 1060 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 TMEM206Q9H813 350 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 NHEJ1Q9H9Q4 299 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 ATP8A2Q9NTI2 1148 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 NUP188Q5SRE5 1749 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 RREB1Q92766 1687 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 H0Y3Z8 333 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 MX2P20592 715 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 RPL5P46777 297 aaKnown RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 ITGB3BPQ13352 177 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 FAM133BQ5BKY9 247 aaKnown RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 ACAD11Q709F0 780 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 STRA8Q7Z7C7 330 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 SLC35F6Q8N357 371 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 RBM46Q8TBY0 533 aaKnown RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 ZNF594Q96JF6 807 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 VCPIP1Q96JH7 1222 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 TGS1Q96RS0 853 aaKnown RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 TUBGCP2Q9BSJ2 902 aa5.15□□□□□ -1.59
PTPRD-203ENST00000381196 UNKQ9C0B0 810 aaKnown RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 COL22A1Q8NFW1 1626 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-203ENST00000381196 KIF28PB7ZC32 967 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 BLMHQ13867 455 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 ME3Q16798 604 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 HADHQ16836 314 aaKnown RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 TIMM50Q3ZCQ8 353 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 TNNI3KQ59H18 835 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 NET1Q7Z628 596 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 APOBEC3FQ8IUX4 373 aaKnown RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 GUF1Q8N442 669 aaKnown RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 NCLNQ969V3 563 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 KLHL4Q9C0H6 718 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 FANCEQ9HB96 536 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 PSMC3IPQ9P2W1 217 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 DNM3Q9UQ16 869 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 PCDHA1Q9Y5I3 950 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 FPGT-TNNI3KV9GXZ4 949 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 ECM29Q5VYK3 1845 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 RBM47A0AV96 593 aaKnown RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 USP17L3A6NCW0 530 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 USP17L4A6NCW7 530 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 KBTBD13C9JR72 458 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 IL6STP40189 918 aaPredicted RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 USP17L1Q7RTZ2 530 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 RFFLQ8WZ73 363 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 TUBGCP3Q96CW5 907 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 YTHDF1Q9BYJ9 559 aaKnown RBP5.14□□□□□ -1.59
PTPRD-203ENST00000381196 RAD21L1Q9H4I0 556 aa5.14□□□□□ -1.59
PTPRD-203ENST00000381196 CNGB3Q9NQW8 809 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms