RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ATXN2LQ8WWM7 1075 aaKnown RBP17.47■□□□□ 0.39
VPS16-203ENST00000380469 POMGNT1Q8WZA1 660 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 ZNF317Q96PQ6 595 aaPredicted RBP17.47■□□□□ 0.39
VPS16-203ENST00000380469 ADAM7Q9H2U9 754 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 WHRNQ9P202 907 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 FSCN2O14926 492 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 ASAP2O43150 1006 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 DLATP10515 647 aaKnown RBP17.47■□□□□ 0.39
VPS16-203ENST00000380469 RPS6P62753 249 aaKnown RBP17.47■□□□□ 0.39
VPS16-203ENST00000380469 ENOSF1Q7L5Y1 443 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 OTUD6AQ7L8S5 288 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 LARGE2Q8N3Y3 721 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 PSPC1Q8WXF1 523 aaKnown RBP17.47■□□□□ 0.39
VPS16-203ENST00000380469 DDX1Q92499 740 aaKnown RBP17.47■□□□□ 0.39
VPS16-203ENST00000380469 LPAR1Q92633 364 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 KIFC3Q9BVG8 833 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 SLC40A1Q9NP59 571 aa17.47■□□□□ 0.39
VPS16-203ENST00000380469 TOPORSQ9NS56 1045 aaPredicted RBP17.47■□□□□ 0.39
VPS16-203ENST00000380469 DNM1LO00429 736 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 ATP9AO75110 1047 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 CYP24A1Q07973 514 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 TAX1BP1Q86VP1 789 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 C1orf54Q8WWF1 131 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 SLCO2A1Q92959 643 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 RMDN3Q96TC7 470 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 CCDC113Q9H0I3 377 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 SLC38A10Q9HBR0 1119 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 ANAPC7Q9UJX3 599 aa17.46■□□□□ 0.39
VPS16-203ENST00000380469 RASSF9O75901 435 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 CCNE2O96020 404 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 GHRP10912 638 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 ITIH2P19823 946 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 MAN1A1P33908 653 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 KRT17Q04695 432 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 AUHQ13825 339 aaKnown RBP17.46■□□□□ 0.38
VPS16-203ENST00000380469 SYDE1Q6ZW31 735 aaPredicted RBP17.46■□□□□ 0.38
VPS16-203ENST00000380469 SV2AQ7L0J3 742 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 SPIRE2Q8WWL2 714 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 CCT6BQ92526 530 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 DHX38Q92620 1227 aaKnown RBP17.46■□□□□ 0.38
VPS16-203ENST00000380469 FAM81BQ96LP2 452 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 FBXL18Q96ME1 805 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 PRMT1Q99873 361 aaKnown RBP17.46■□□□□ 0.38
VPS16-203ENST00000380469 ASIC3Q9UHC3 531 aa17.46■□□□□ 0.38
VPS16-203ENST00000380469 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.46■□□□□ 0.38
VPS16-203ENST00000380469 TESPA1A2RU30 521 aaPredicted RBP17.45■□□□□ 0.38
VPS16-203ENST00000380469 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 SCTRP47872 440 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 SNX1Q13596 522 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 UBAP2Q5T6F2 1119 aaKnown RBP17.45■□□□□ 0.38
VPS16-203ENST00000380469 ARHGEF16Q5VV41 709 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 MFSD5Q6N075 450 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 NTPCRQ9BSD7 190 aaKnown RBP17.45■□□□□ 0.38
VPS16-203ENST00000380469 C17orf75Q9HAS0 396 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 SAMD15Q9P1V8 674 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 PSME4Q14997 1843 aa17.45■□□□□ 0.38
VPS16-203ENST00000380469 CCT8L1PA6NM43 557 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 SCP2P22307 547 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 GCNT1Q02742 428 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 MAP3K10Q02779 954 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 LLGL1Q15334 1064 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 TNFAIP8L3Q5GJ75 292 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 ANO5Q75V66 913 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 RTKN2Q8IZC4 609 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 GPD1LQ8N335 351 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 RDM1Q8NG50 284 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 GRK7Q8WTQ7 553 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 MOV10L1Q9BXT6 1211 aaKnown RBP17.44■□□□□ 0.38
VPS16-203ENST00000380469 NSRP1Q9H0G5 558 aaKnown RBP17.44■□□□□ 0.38
VPS16-203ENST00000380469 CCDC134Q9H6E4 229 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 PXMP2Q9NR77 195 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 ZC3H11AO75152 810 aaKnown RBP eCLIP17.44■□□□□ 0.38
VPS16-203ENST00000380469 ATP2C2O75185 946 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 VIMP08670 466 aaKnown RBP17.44■□□□□ 0.38
VPS16-203ENST00000380469 MYBL1P10243 752 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 SLC1A1P43005 524 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 ITIH4Q14624 930 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 PIGWQ7Z7B1 504 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 NLRX1Q86UT6 975 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 LRRC34Q8IZ02 419 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 MTMR14Q8NCE2 650 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 TRIM11Q96F44 468 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 SNF8Q96H20 258 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 CEP170P1Q96L14 293 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 PDCD2LQ9BRP1 358 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 HOMER3Q9NSC5 361 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 C1orf112Q9NSG2 853 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 PCDHA10Q9Y5I2 948 aa17.44■□□□□ 0.38
VPS16-203ENST00000380469 ZBED4O75132 1171 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 ENPEPQ07075 957 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 MCOLN2Q8IZK6 566 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 BICD1Q96G01 975 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 CDC42EP4Q9H3Q1 356 aaKnown RBP17.43■□□□□ 0.38
VPS16-203ENST00000380469 AVENQ9NQS1 362 aaPredicted RBP17.43■□□□□ 0.38
VPS16-203ENST00000380469 HNRNPDLO14979 420 aaKnown RBP17.43■□□□□ 0.38
VPS16-203ENST00000380469 GAS8O95995 478 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 ATP5DP30049 168 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 BPIFB4P59827 614 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 SPRED3Q2MJR0 410 aa17.43■□□□□ 0.38
VPS16-203ENST00000380469 SLC39A4Q6P5W5 647 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms