RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CAPSQ13938 189 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 SAPCD2Q86UD0 394 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 ZNF516Q92618 1163 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 GLG1Q92896 1179 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 KRT12Q99456 494 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 CGRRF1Q99675 332 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 SLITRK6Q9H5Y7 841 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 RBAKQ9NYW8 714 aaPredicted RBP24.84■■□□□ 1.57
VPS16-201ENST00000380443 UVRAGQ9P2Y5 699 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 SLC45A1Q9Y2W3 748 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 ADGRA2Q96PE1 1338 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 CYP1A2P05177 515 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 SURF1Q15526 300 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 Q3C1V9 767 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 CDCA2Q69YH5 1023 aaPredicted RBP24.84■■□□□ 1.57
VPS16-201ENST00000380443 CCDC62Q6P9F0 684 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 CRELD2Q6UXH1 353 aaPredicted RBP24.84■■□□□ 1.57
VPS16-201ENST00000380443 SLC47A2Q86VL8 602 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 ZBTB8OSQ8IWT0 167 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 DHX37Q8IY37 1157 aaKnown RBP24.84■■□□□ 1.57
VPS16-201ENST00000380443 PCDHB18PQ96TA0 734 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 MRPL4Q9BYD3 311 aaKnown RBP24.84■■□□□ 1.57
VPS16-201ENST00000380443 SMARCAD1Q9H4L7 1026 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 ST7Q9NRC1 585 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 GTF3C4Q9UKN8 822 aa24.84■■□□□ 1.57
VPS16-201ENST00000380443 NOC2LQ9Y3T9 749 aaKnown RBP24.84■■□□□ 1.57
VPS16-201ENST00000380443 DDX3YO15523 660 aaKnown RBP24.83■■□□□ 1.57
VPS16-201ENST00000380443 HEXIM1O94992 359 aaKnown RBP24.83■■□□□ 1.57
VPS16-201ENST00000380443 MYBL2P10244 700 aa24.83■■□□□ 1.57
VPS16-201ENST00000380443 NLRP11P59045 1033 aaKnown RBP24.83■■□□□ 1.57
VPS16-201ENST00000380443 ERVK-9P63128 1117 aa24.83■■□□□ 1.57
VPS16-201ENST00000380443 CCNA1P78396 465 aa24.83■■□□□ 1.57
VPS16-201ENST00000380443 PPP1R2P3Q6NXS1 205 aa24.83■■□□□ 1.57
VPS16-201ENST00000380443 MOB2Q70IA6 237 aa24.83■■□□□ 1.57
VPS16-201ENST00000380443 TARS2Q9BW92 718 aaKnown RBP24.83■■□□□ 1.57
VPS16-201ENST00000380443 GOLPH3Q9H4A6 298 aa24.83■■□□□ 1.57
VPS16-201ENST00000380443 HLA-DRAP01903 254 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 HUNKP57058 714 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 SLC7A5Q01650 507 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 TTLL4Q14679 1199 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 DEFB115Q30KQ5 88 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 ACAD10Q6JQN1 1059 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 UBL4BQ8N7F7 174 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 PRPF31Q8WWY3 499 aaKnown RBP24.82■■□□□ 1.56
VPS16-201ENST00000380443 DDX1Q92499 740 aaKnown RBP24.82■■□□□ 1.56
VPS16-201ENST00000380443 TATDN2Q93075 761 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 HHIPL1Q96JK4 782 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 PCDHB2Q9Y5E7 798 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 H3BQF6 201 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 POLR3GO15318 223 aaPredicted RBP24.82■■□□□ 1.56
VPS16-201ENST00000380443 PGK2P07205 417 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 TBXAS1P24557 533 aaPredicted RBP24.82■■□□□ 1.56
VPS16-201ENST00000380443 CCDC26Q8TAB7 109 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 SLC10A4Q96EP9 437 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 TRIM11Q96F44 468 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 CCDC113Q9H0I3 377 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 PRDM10Q9NQV6 1147 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 COG5Q9UP83 839 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 ALG6Q9Y672 507 aa24.82■■□□□ 1.56
VPS16-201ENST00000380443 KRIT1O00522 736 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 CLDN3O15551 220 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 ASAP2O43150 1006 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 TOM1L1O75674 476 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 ARIH2O95376 493 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 MMEP08473 750 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 PIK3CAP42336 1068 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 TFDP1Q14186 410 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 ALS2CLQ60I27 953 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 EEPD1Q7L9B9 569 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 MAATS1Q7Z4T9 603 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 WHAMMQ8TF30 809 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 CCDC102AQ96A19 550 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 SPATA33Q96N06 139 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 WNT8AQ9H1J5 351 aa24.81■■□□□ 1.56
VPS16-201ENST00000380443 HBP1O60381 514 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 MYBL1P10243 752 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 ACOT2P49753 483 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 CUL1Q13616 776 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 TAF3Q5VWG9 929 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 TDRD10Q5VZ19 366 aaKnown RBP24.8■■□□□ 1.56
VPS16-201ENST00000380443 BRSK2Q8IWQ3 736 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 HAPLN2Q9GZV7 340 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 EPB41L5Q9HCM4 733 aa24.8■■□□□ 1.56
VPS16-201ENST00000380443 GLI1P08151 1106 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 KRT5P13647 590 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 GUCY2DQ02846 1103 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 BIRC3Q13489 604 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 PLCB4Q15147 1175 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 CLEC16AQ2KHT3 1053 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 TRIM72Q6ZMU5 477 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 SND1Q7KZF4 910 aaKnown RBP eCLIP24.79■■□□□ 1.56
VPS16-201ENST00000380443 PSD3Q9NYI0 1048 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 MSCO60682 206 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 LAMTOR4Q0VGL1 99 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 MAPK6Q16659 721 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 HSDL1Q3SXM5 330 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 GPRC5AQ8NFJ5 357 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 EXOC4Q96A65 974 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 ZBTB45Q96K62 511 aaPredicted RBP24.79■■□□□ 1.56
VPS16-201ENST00000380443 ANKFY1Q9P2R3 1169 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms