RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
CHD3-203ENST00000380358 ERVV-2B6SEH9 535 aa13.1□□□□□ -0.31
CHD3-203ENST00000380358 USP17L10C9JJH3 530 aa13.1□□□□□ -0.31
CHD3-203ENST00000380358 TAF1CQ15572 869 aaPredicted RBP13.1□□□□□ -0.31
CHD3-203ENST00000380358 ENAHQ8N8S7 591 aaPredicted RBP13.1□□□□□ -0.31
CHD3-203ENST00000380358 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHD3-203ENST00000380358 CARMIL3Q8ND23 1372 aa13.1□□□□□ -0.31
CHD3-203ENST00000380358 NFIBO00712 420 aa13.1□□□□□ -0.31
CHD3-203ENST00000380358 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
CHD3-203ENST00000380358 DHTKD1Q96HY7 919 aaPredicted RBP13.1□□□□□ -0.31
CHD3-203ENST00000380358 PIF1Q9H611 641 aa13.1□□□□□ -0.31
CHD3-203ENST00000380358 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 GSTM1P09488 218 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 BCAR1P56945 870 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 POTEGQ6S5H5 508 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 POTEEQ6S8J3 1075 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 SLC30A5Q8TAD4 765 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 SPATA16Q9BXB7 569 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 FAM49BQ9NUQ9 324 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ZC3H7BQ9UGR2 993 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 CDC23Q9UJX2 597 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 APOA1P02647 267 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 NFICP08651 508 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 CHRM3P20309 590 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ACTN3Q08043 901 aaPredicted RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 MYCBPQ99417 103 aaPredicted RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 ZSWIM5Q9P217 1185 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 KRT38O76015 456 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 SH3BGRP55822 239 aaPredicted RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 OLFML2BQ68BL8 750 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 HEATR4Q86WZ0 1026 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ABCC12Q96J65 1359 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 APOL1O14791 398 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 FGFR1P11362 822 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 PHACTR4Q8IZ21 702 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 SLC30A1Q9Y6M5 507 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 CCDC151A5D8V7 595 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 POTECB2RU33 542 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 LRG1P02750 347 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 IL10P22301 178 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ZNF564Q8TBZ8 553 aaPredicted RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 EML4Q9HC35 981 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 H0Y626 953 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 TRIM16O95361 564 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 NUDT14O95848 222 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ERVK-10P10266 1014 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ACADMP11310 421 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 ALDH1A3P47895 512 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 MAGOHP61326 146 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 CDK17Q00537 523 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 NOL9Q5SY16 702 aaKnown RBP13.09□□□□□ -0.31
CHD3-203ENST00000380358 NANOGNBQ7Z5D8 188 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 NMRK2Q9NPI5 230 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 FBXL21Q9UKT6 434 aa13.09□□□□□ -0.31
CHD3-203ENST00000380358 RGS5O15539 181 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 ASAP2O43150 1006 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 ENO2P09104 434 aaPredicted RBP13.08□□□□□ -0.31
CHD3-203ENST00000380358 FGFR4P22455 802 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 GABPB1Q06547 395 aaPredicted RBP13.08□□□□□ -0.31
CHD3-203ENST00000380358 NCAPHQ15003 741 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 RTKN2Q8IZC4 609 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 HASPINQ8TF76 798 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 TMEM143Q96AN5 459 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 VPS50Q96JG6 964 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 FRMD6Q96NE9 622 aa13.08□□□□□ -0.31
CHD3-203ENST00000380358 ABI2Q9NYB9 513 aaPredicted RBP13.08□□□□□ -0.31
CHD3-203ENST00000380358 RBAKQ9NYW8 714 aaPredicted RBP13.08□□□□□ -0.31
CHD3-203ENST00000380358 TNNI3P19429 210 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 FAM160B2Q86V87 743 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 UBE2Q2Q8WVN8 375 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 TGS1Q96RS0 853 aaKnown RBP13.08□□□□□ -0.32
CHD3-203ENST00000380358 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 NDST4Q9H3R1 872 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 SNX9Q9Y5X1 595 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 ESYT3A0FGR9 886 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 RNF103O00237 685 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 GPR1P46091 355 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 PRELPP51888 382 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 BRAFP15056 766 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 ALOX15P16050 662 aaPredicted RBP13.08□□□□□ -0.32
CHD3-203ENST00000380358 HMGCS2P54868 508 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 IPMKQ8NFU5 416 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 TUBB6Q9BUF5 446 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms