RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 KARSQ15046 597 aaKnown RBP27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 MPZL3Q6UWV2 235 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 TAS1R3Q7RTX0 852 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 CEP57Q86XR8 500 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 GLYCTKQ8IVS8 523 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 TDRD5Q8NAT2 981 aaKnown RBP27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 EDAQ92838 391 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 BICD1Q96G01 975 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 NTPCRQ9BSD7 190 aaKnown RBP27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 ANKFY1Q9P2R3 1169 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 ODF2LQ9ULJ1 636 aa27.03■■□□□ 1.92
TNFRSF4-201ENST00000379236 FAM13AO94988 1023 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 FAM171A1Q5VUB5 890 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 PALB2Q86YC2 1186 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 GPR65Q8IYL9 337 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 CEP120Q8N960 986 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 UROC1Q96N76 676 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 ACAP3Q96P50 834 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 CXCL16Q9H2A7 254 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 CLIC4Q9Y696 253 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 VWA8A3KMH1 1905 aa27.02■■□□□ 1.92
TNFRSF4-201ENST00000379236 TXLNAP40222 546 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 GRIN1Q05586 938 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 RESTQ13127 1097 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 GPR149Q86SP6 731 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 TMEM161BQ8NDZ6 487 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 RAD54LQ92698 747 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 REEP2Q9BRK0 252 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 TTPALQ9BTX7 342 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 ZHX3Q9H4I2 956 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 PTPRHQ9HD43 1115 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 SLC38A7Q9NVC3 462 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 FNIP2Q9P278 1114 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 CCDC39Q9UFE4 941 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 TRIOO75962 3097 aa27.01■■□□□ 1.91
TNFRSF4-201ENST00000379236 TBCAO75347 108 aaKnown RBP27■■□□□ 1.91
TNFRSF4-201ENST00000379236 TOM1L1O75674 476 aa27■■□□□ 1.91
TNFRSF4-201ENST00000379236 MAPTP10636 758 aaKnown RBP27■■□□□ 1.91
TNFRSF4-201ENST00000379236 MARCKSP29966 332 aaPredicted RBP27■■□□□ 1.91
TNFRSF4-201ENST00000379236 CEBPZQ03701 1054 aaKnown RBP27■■□□□ 1.91
TNFRSF4-201ENST00000379236 MCM6Q14566 821 aa27■■□□□ 1.91
TNFRSF4-201ENST00000379236 NOLC1Q14978 699 aaKnown RBP eCLIP27■■□□□ 1.91
TNFRSF4-201ENST00000379236 NAB2Q15742 525 aa27■■□□□ 1.91
TNFRSF4-201ENST00000379236 PDXDC1Q6P996 788 aa27■■□□□ 1.91
TNFRSF4-201ENST00000379236 C15orf39Q6ZRI6 1047 aa27■■□□□ 1.91
TNFRSF4-201ENST00000379236 CCDC149Q6ZUS6 474 aa27■■□□□ 1.91
TNFRSF4-201ENST00000379236 MYCT1Q8N699 235 aa27■■□□□ 1.91
TNFRSF4-201ENST00000379236 LARP4BQ92615 738 aaKnown RBP27■■□□□ 1.91
TNFRSF4-201ENST00000379236 PPP1R10Q96QC0 940 aaKnown RBP27■■□□□ 1.91
TNFRSF4-201ENST00000379236 MYO10Q9HD67 2058 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 C2CD4DB7Z1M9 353 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 K7ENM7 598 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 B3GAT3O94766 335 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 MYBP10242 640 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 NCKAP1LP55160 1127 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 ZXDAP98168 799 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 PSMD5Q16401 504 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 PTPN21Q16825 1174 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 ARSHQ5FYA8 562 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 RTP2Q5QGT7 225 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 PRSS55Q6UWB4 352 aaPredicted RBP26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 ZPBP2Q6X784 338 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 ACSF2Q96CM8 615 aaPredicted RBP26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 PARVGQ9HBI0 331 aa26.99■■□□□ 1.91
TNFRSF4-201ENST00000379236 SMIM28A0A1B0GU29 152 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 CLDN3O15551 220 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 SPATA31D3P0C874 917 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 RPL17P18621 184 aaKnown RBP26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 PROZP22891 400 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 CLCNKBP51801 687 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 DCLRE1AQ6PJP8 1040 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 SPATA31D4Q6ZUB0 917 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 HAUS6Q7Z4H7 955 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 PLCD3Q8N3E9 789 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 HDAC7Q8WUI4 952 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 SNX27Q96L92 541 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 CCSER1Q9C0I3 900 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 PLEKHA4Q9H4M7 779 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 ZSCAN16Q9H4T2 348 aaPredicted RBP26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 BLOC1S4Q9NUP1 217 aa26.98■■□□□ 1.91
TNFRSF4-201ENST00000379236 CCDC195A0A1B0GUA6 201 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 TRAPPC3O43617 180 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 STX6O43752 255 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 BRD1O95696 1058 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 C1RP00736 705 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 HSP90AA1P07900 732 aaKnown RBP26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 SCP2P22307 547 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 LIG4P49917 911 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 FAM173BQ6P4H8 233 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 TRIM67Q6ZTA4 783 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 HSCBQ8IWL3 235 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 CMASQ8NFW8 434 aaPredicted RBP26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 PIK3R5Q8WYR1 880 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 ZBTB45Q96K62 511 aaPredicted RBP26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 PIDD1Q9HB75 910 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 GOLGA2P5Q9HBQ8 144 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 USTQ9Y2C2 406 aa26.97■■□□□ 1.91
TNFRSF4-201ENST00000379236 TMEM189-UBE2V1I3L0A0 370 aa26.96■■□□□ 1.91
TNFRSF4-201ENST00000379236 TGM5O43548 720 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms