RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 ZC3H11AO75152 810 aaKnown RBP eCLIP19.47■□□□□ 0.71
TDP2-202ENST00000378198 GCNT1Q02742 428 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 CALCOCO2Q13137 446 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 ANO5Q75V66 913 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 CPNE8Q86YQ8 564 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 MAIP1Q8WWC4 291 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 ZBED3Q96IU2 234 aaPredicted RBP19.47■□□□□ 0.71
TDP2-202ENST00000378198 SELENOSQ9BQE4 189 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 MOV10L1Q9BXT6 1211 aaKnown RBP19.47■□□□□ 0.71
TDP2-202ENST00000378198 ROPN1BQ9BZX4 212 aaPredicted RBP19.47■□□□□ 0.71
TDP2-202ENST00000378198 ROPN1Q9HAT0 212 aaPredicted RBP19.47■□□□□ 0.71
TDP2-202ENST00000378198 PTPN22Q9Y2R2 807 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 PARP14Q460N5 1801 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 KCNJ1P48048 391 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 PPP1R7Q15435 360 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 ARHGEF16Q5VV41 709 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 XRRA1Q6P2D8 792 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 KCNV1Q6PIU1 500 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 NSMFQ6X4W1 530 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 SV2AQ7L0J3 742 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 TRMT10CQ7L0Y3 403 aaKnown RBP19.47■□□□□ 0.71
TDP2-202ENST00000378198 CCDC13Q8IYE1 715 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 GPD1LQ8N335 351 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 TTLL6Q8N841 843 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 POMGNT1Q8WZA1 660 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 SENP7Q9BQF6 1050 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 KIFC3Q9BVG8 833 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 WHRNQ9P202 907 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 PCDHA10Q9Y5I2 948 aa19.47■□□□□ 0.71
TDP2-202ENST00000378198 TESPA1A2RU30 521 aaPredicted RBP19.46■□□□□ 0.71
TDP2-202ENST00000378198 DKC1O60832 514 aaKnown RBP eCLIP19.46■□□□□ 0.71
TDP2-202ENST00000378198 FGFR4P22455 802 aa19.46■□□□□ 0.71
TDP2-202ENST00000378198 TNFAIP8L3Q5GJ75 292 aa19.46■□□□□ 0.71
TDP2-202ENST00000378198 SLC39A4Q6P5W5 647 aa19.46■□□□□ 0.71
TDP2-202ENST00000378198 ZNF317Q96PQ6 595 aaPredicted RBP19.46■□□□□ 0.71
TDP2-202ENST00000378198 OSBPL7Q9BZF2 842 aa19.46■□□□□ 0.71
TDP2-202ENST00000378198 VPS33BQ9H267 617 aa19.46■□□□□ 0.71
TDP2-202ENST00000378198 ADAM7Q9H2U9 754 aa19.46■□□□□ 0.71
TDP2-202ENST00000378198 ZNF277Q9NRM2 450 aaPredicted RBP19.46■□□□□ 0.71
TDP2-202ENST00000378198 TOPORSQ9NS56 1045 aaPredicted RBP19.46■□□□□ 0.71
TDP2-202ENST00000378198 GINM1Q9NU53 330 aa19.46■□□□□ 0.71
TDP2-202ENST00000378198 RASGRF2O14827 1237 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 ZBED4O75132 1171 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 GARTP22102 1010 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 MAPK4P31152 587 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 LACTB2Q53H82 288 aaPredicted RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 ATXN2LQ8WWM7 1075 aaKnown RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 DHX38Q92620 1227 aaKnown RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 CEP89Q96ST8 783 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 AVENQ9NQS1 362 aaPredicted RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 SMIM23A6NLE4 172 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 WNT10BO00744 389 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 FDX1P10109 184 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 UNGP13051 313 aaPredicted RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 KRT5P13647 590 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 MAN1A1P33908 653 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 SLC1A1P43005 524 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 IFI35P80217 286 aaPredicted RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 SGO2Q562F6 1265 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 SYDE1Q6ZW31 735 aaPredicted RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 TAOK1Q7L7X3 1001 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 NLRX1Q86UT6 975 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 ZNF677Q86XU0 584 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 BSNDQ8WZ55 320 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 TRIM11Q96F44 468 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 CEP170P1Q96L14 293 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 ANAPC7Q9UJX3 599 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 ZNRF3Q9ULT6 936 aa19.45■□□□□ 0.7
TDP2-202ENST00000378198 TNS1Q9HBL0 1735 aaKnown RBP19.45■□□□□ 0.7
TDP2-202ENST00000378198 MAFGO15525 162 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 CLDN3O15551 220 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 ASAP2O43150 1006 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 MYBL1P10243 752 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 DLATP10515 647 aaKnown RBP19.44■□□□□ 0.7
TDP2-202ENST00000378198 ITIH2P19823 946 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 BRDTQ58F21 947 aaPredicted RBP19.44■□□□□ 0.7
TDP2-202ENST00000378198 MFSD5Q6N075 450 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 EPS8L3Q8TE67 593 aaKnown RBP19.44■□□□□ 0.7
TDP2-202ENST00000378198 GPRASP2Q96D09 838 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 KDM4CQ9H3R0 1056 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 CCDC134Q9H6E4 229 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 INTS9Q9NV88 658 aaKnown RBP19.44■□□□□ 0.7
TDP2-202ENST00000378198 GHRP10912 638 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 SCP2P22307 547 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 CCND2P30279 289 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 GTF2A1P52655 376 aaPredicted RBP19.44■□□□□ 0.7
TDP2-202ENST00000378198 RTP1P59025 263 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 KRT17Q04695 432 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 AUHQ13825 339 aaKnown RBP19.44■□□□□ 0.7
TDP2-202ENST00000378198 NBPF9Q3BBW0 867 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 ZNF568Q3ZCX4 644 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 ANKRD20A8PQ5CZ79 823 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 TAX1BP1Q86VP1 789 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 MCOLN2Q8IZK6 566 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 ATP6V0A1Q93050 837 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 CCDC114Q96M63 670 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 C1orf112Q9NSG2 853 aa19.44■□□□□ 0.7
TDP2-202ENST00000378198 HNRNPDLO14979 420 aaKnown RBP19.43■□□□□ 0.7
TDP2-202ENST00000378198 ABCD1P33897 745 aa19.43■□□□□ 0.7
TDP2-202ENST00000378198 BPIFB4P59827 614 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms