RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CCNT1O60563 726 aaKnown RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 STX1BP61266 288 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 RELAQ04206 551 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 FMR1Q06787 632 aaKnown RBP eCLIP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 SPRED3Q2MJR0 410 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 STOX1Q6ZVD7 989 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 RMDN1Q96DB5 314 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 DEPDC5O75140 1603 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 TMEM120BA0PK00 339 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 UNCXA6NJT0 531 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 XPO1O14980 1071 aaKnown RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 MAGEB3O15480 346 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 KRT36O76013 467 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 DDAH1O94760 285 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 ALADP13716 330 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 PRKACAP17612 351 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 EEF1GP26641 437 aaKnown RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 EIF4A3P38919 411 aaKnown RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 CASP5P51878 434 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 PTK2Q05397 1052 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 MIGA2Q7L4E1 593 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 ZNF804AQ7Z570 1209 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 COL23A1Q86Y22 540 aaPredicted RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 MB21D2Q8IYB1 491 aaPredicted RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 PYROXD1Q8WU10 500 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 NAP1L4Q99733 375 aaKnown RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 FAM32AQ9Y421 112 aaKnown RBP12.45□□□□□ -0.42
NPHP4-202ENST00000378161 MAP3K15Q6ZN16 1313 aa12.45□□□□□ -0.42
NPHP4-202ENST00000378161 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 TXKP42681 527 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 GPSM2P81274 684 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 TPTE2Q6XPS3 522 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 TREML1Q86YW5 311 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 GRAMD1CQ8IYS0 662 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 SPERTQ8NA61 448 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 C2orf49Q9BVC5 232 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 DIS3Q9Y2L1 958 aaKnown RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 PITPNM2Q9BZ72 1349 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 I3L4J1 428 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 GNPATO15228 680 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 THAP12O43422 761 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 PEX11AO75192 247 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 PAEPP09466 180 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 DDX42Q86XP3 938 aaKnown RBP eCLIP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ANKRD13BQ86YJ7 626 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 CCDC105Q8IYK2 499 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ECSITQ9BQ95 431 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 HEPHQ9BQS7 1158 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 TRIM56Q9BRZ2 755 aaKnown RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 IMPG2Q9BZV3 1241 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 DDX47Q9H0S4 455 aaKnown RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 AIPL1Q9NZN9 384 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 EMC3Q9P0I2 261 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 SLC16A2P36021 539 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ACAP1Q15027 740 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 KYNUQ16719 465 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 RABL6Q3YEC7 729 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 IYDQ6PHW0 289 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ELMSAN1Q6PJG2 1045 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 SDR42E1Q8WUS8 393 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 STARD8Q92502 1023 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ZFYVE19Q96K21 471 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 VTA1Q9NP79 307 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ASIC3Q9UHC3 531 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 DCTN4Q9UJW0 460 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ZMYND8Q9ULU4 1186 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 PIK3C2BO00750 1634 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 JAK1P23458 1154 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 LRPAP1P30533 357 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 CDK17Q00537 523 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 TCP11X2Q5H9J9 407 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 RARS2Q5T160 578 aaKnown RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 EGFLAMQ63HQ2 1017 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 MB21D1Q8N884 522 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 PACSIN2Q9UNF0 486 aaPredicted RBP12.44□□□□□ -0.42
NPHP4-202ENST00000378161 TFR2Q9UP52 801 aa12.44□□□□□ -0.42
NPHP4-202ENST00000378161 ZSCAN5BA6NJL1 495 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 A8MXQ7 604 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 ATP2A1O14983 1001 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 BDNFP23560 247 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 MAP4P27816 1152 aaKnown RBP12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SMU1Q2TAY7 513 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SATL1Q86VE3 508 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 SFR1Q86XK3 245 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 CATSPER1Q8NEC5 780 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 NSL1Q96IY1 281 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 KLHL4Q9C0H6 718 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 EHD1Q9H4M9 534 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 UBN1Q9NPG3 1134 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 TBK1Q9UHD2 729 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 PCDHB6Q9Y5E3 794 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 STK36Q9NRP7 1315 aa12.43□□□□□ -0.42
NPHP4-202ENST00000378161 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms