RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 ZKSCAN8Q15776 578 aaPredicted RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 SLC18A3Q16572 532 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ATP13A4Q4VNC1 1196 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 EEF1DP3Q658K8 133 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 EP400NLQ6ZTU2 488 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 KIAA0319LQ8IZA0 1049 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 SLC5A5Q92911 643 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 FAM204AQ9H8W3 233 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 NUDT5Q9UKK9 219 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 AFG3L2Q9Y4W6 797 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 WDR90Q96KV7 1748 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 GOLGA6CA6NDK9 693 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 POC1B-GALNT4F8VUJ3 575 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 GOLGA6DP0CG33 693 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 GTF2H1P32780 548 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 CETN2P41208 172 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 NOP14P78316 857 aaKnown RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 CALCOCO2Q13137 446 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 TBX2Q13207 712 aaPredicted RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 CCL14Q16627 93 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 Q4G0T1 1027 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 PCNX4Q63HM2 1172 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 CC2D1AQ6P1N0 951 aaPredicted RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 TMEM192Q8IY95 271 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 DAW1Q8N136 415 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 C1orf131Q8NDD1 294 aaKnown RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 LMBR1Q8WVP7 490 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 DNAJB3Q8WWF6 145 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 CEP63Q96MT8 703 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 GOLGA6AQ9NYA3 693 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ZSCAN20P17040 1043 aaPredicted RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 RRM1P23921 792 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 SMARCA1P28370 1054 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 PTGER2P43116 358 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 CLK2P49760 499 aaKnown RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ERVK-9P63128 1117 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 IRX4P78413 519 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF564Q8TBZ8 553 aaPredicted RBP8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ERLEC1Q96DZ1 483 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 LPIN3Q9BQK8 851 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 GGT7Q9UJ14 662 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 ROBO3Q96MS0 1386 aa8.68□□□□□ -1.02
CKAP2-203ENST00000378037 A0A1W2PQC6 194 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 WDR91A4D1P6 747 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 IQCA1LA6NCM1 817 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 EIF3CLB5ME19 914 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 H3BRB1 525 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 M0QYV0 167 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SUPT20HL2P0C7V6 817 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 MYBL2P10244 700 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 LCP1P13796 627 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SFNP31947 248 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 ARHGAP25P42331 645 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 FAXCQ5TGI0 409 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SCARA3Q6AZY7 606 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 IL31Q6EBC2 164 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 UBL4BQ8N7F7 174 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 KRT35Q92764 455 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SEMA4DQ92854 862 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 IWS1Q96ST2 819 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 EIF3CQ99613 913 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 POLR3CQ9BUI4 534 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 TUT1Q9H6E5 874 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 GPATCH2LQ9NWQ4 482 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 OGFRQ9NZT2 677 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 PRG3Q9Y2Y8 225 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 UTP11Q9Y3A2 253 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 ADGRA3Q8IWK6 1321 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 FAM237AA0A1B0GTK4 181 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 DDX3XO00571 662 aaKnown RBP eCLIP8.67□□□□□ -1.024e-13■■■■□ 22.4
CKAP2-203ENST00000378037 TBX3O15119 743 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 TLR3O15455 904 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 TCP1P17987 556 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SCP2P22307 547 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 GCLCP48506 637 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 PSMC1P62191 440 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SPIRE1Q08AE8 756 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 WHAMMP3Q1A5X7 153 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SGO2Q562F6 1265 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 HOOK3Q86VS8 718 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 CTAGE3PQ8IX95 158 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 C10orf67Q8IYJ2 551 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 NME8Q8N427 588 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 GOLGA5Q8TBA6 731 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 ZNF507Q8TCN5 953 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 PWWP2AQ96N64 755 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 MCEEQ96PE7 176 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SENP7Q9BQF6 1050 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 CEP41Q9BYV8 373 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 KCTD10Q9H3F6 313 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 VPS37BQ9H9H4 285 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SIK3Q9Y2K2 1263 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 NOC2LQ9Y3T9 749 aaKnown RBP8.67□□□□□ -1.02
CKAP2-203ENST00000378037 BTBD19C9JJ37 291 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 SGK1O00141 431 aa8.67□□□□□ -1.02
CKAP2-203ENST00000378037 CAPN9O14815 690 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms