RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TOM1L1O75674 476 aa15.46■□□□□ 0.06
TCOF1-202ENST00000377797 VSNL1P62760 191 aa15.46■□□□□ 0.06
TCOF1-202ENST00000377797 SETDB1Q15047 1291 aa15.46■□□□□ 0.06
TCOF1-202ENST00000377797 FAM102AQ5T9C2 384 aaPredicted RBP15.46■□□□□ 0.06
TCOF1-202ENST00000377797 CCDC13Q8IYE1 715 aa15.46■□□□□ 0.06
TCOF1-202ENST00000377797 SLC35C1Q96A29 364 aa15.46■□□□□ 0.06
TCOF1-202ENST00000377797 UVRAGQ9P2Y5 699 aa15.46■□□□□ 0.06
TCOF1-202ENST00000377797 ZNF541Q9H0D2 1346 aa15.46■□□□□ 0.06
TCOF1-202ENST00000377797 TMEM253P0C7T8 217 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 RARBP10826 455 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 KIAA1841Q6NSI8 718 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 PARVAQ9NVD7 372 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 INTS13Q9NVM9 706 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-202ENST00000377797 ATP9AO75110 1047 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 SPATA31C1P0DKV0 1188 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 ALDH3A1P30838 453 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 TAS1R2Q8TE23 839 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 LRRC1Q9BTT6 524 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 ASNSD1Q9NWL6 643 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 PABPN1LA6NDY0 278 aaKnown RBP15.45■□□□□ 0.06
TCOF1-202ENST00000377797 RRN3P2A6NIE6 340 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 NFKBIEO00221 500 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 SDC4P31431 198 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 SLC26A2P50443 739 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 CDK17Q00537 523 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 SLMAPQ14BN4 828 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 ECM1Q16610 540 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 SMARCAL1Q9NZC9 954 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 CHORDC1Q9UHD1 332 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-202ENST00000377797 AMACRQ9UHK6 382 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 PPFIA4O75335 1185 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 MMS22LQ6ZRQ5 1243 aa15.45■□□□□ 0.06
TCOF1-202ENST00000377797 ADAMTS3O15072 1205 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 SLCO1A2P46721 670 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 TTC19Q6DKK2 380 aaPredicted RBP15.44■□□□□ 0.06
TCOF1-202ENST00000377797 RAET1EQ8TD07 263 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 BCAS4Q8TDM0 211 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 ATP8B4Q8TF62 1192 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 ZNF560Q96MR9 790 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 NIF3L1Q9GZT8 377 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 MAPTP10636 758 aaKnown RBP15.44■□□□□ 0.06
TCOF1-202ENST00000377797 ADORA2BP29275 332 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 MXRA7P84157 204 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 ALS2CLQ60I27 953 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 SV2AQ7L0J3 742 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 RIOX2Q8IUF8 465 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 CCDC60Q8IWA6 550 aaPredicted RBP15.44■□□□□ 0.06
TCOF1-202ENST00000377797 MICALL1Q8N3F8 863 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 ATMINO43313 823 aaPredicted RBP15.44■□□□□ 0.06
TCOF1-202ENST00000377797 IL18RAPO95256 599 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 PTGER2P43116 358 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 ZNF484Q5JVG2 852 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 CCHCR1Q8TD31 782 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 C18orf8Q96DM3 657 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 RRAGCQ9HB90 399 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 USP20Q9Y2K6 914 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 GTPBP10A4D1E9 387 aaKnown RBP15.44■□□□□ 0.06
TCOF1-202ENST00000377797 ERVK-9P63128 1117 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 CAPN6Q9Y6Q1 641 aa15.44■□□□□ 0.06
TCOF1-202ENST00000377797 H3BRB1 525 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 CLTAP09496 248 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 CLMNQ96JQ2 1002 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 TUT1Q9H6E5 874 aaKnown RBP15.43■□□□□ 0.06
TCOF1-202ENST00000377797 GPBP1L1Q9HC44 474 aaPredicted RBP15.43■□□□□ 0.06
TCOF1-202ENST00000377797 KRT3P12035 628 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 PPIL2Q13356 520 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 TFDP2Q14188 446 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 ZSCAN26Q16670 478 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.43■□□□□ 0.06
TCOF1-202ENST00000377797 NOA1Q8NC60 698 aaKnown RBP15.43■□□□□ 0.06
TCOF1-202ENST00000377797 GABPB2Q8TAK5 448 aaPredicted RBP15.43■□□□□ 0.06
TCOF1-202ENST00000377797 TMC2Q8TDI7 906 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 L2HGDHQ9H9P8 463 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 ALG6Q9Y672 507 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 LAMB4A4D0S4 1761 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 SART1O43290 800 aaKnown RBP15.43■□□□□ 0.06
TCOF1-202ENST00000377797 STRNO43815 780 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 CSDE1O75534 798 aaKnown RBP15.43■□□□□ 0.06
TCOF1-202ENST00000377797 ZBED1O96006 694 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 CHRNA3P32297 505 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 FBF1Q8TES7 1133 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 SPIRE2Q8WWL2 714 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 KRT7P08729 469 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 ADORA2AP29274 412 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 LRRC55Q6ZSA7 311 aa15.43■□□□□ 0.06
TCOF1-202ENST00000377797 INSRRP14616 1297 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 UBA1P22314 1058 aaKnown RBP15.42■□□□□ 0.06
TCOF1-202ENST00000377797 NNTQ13423 1086 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 CCDC137Q6PK04 289 aaKnown RBP15.42■□□□□ 0.06
TCOF1-202ENST00000377797 PACSIN1Q9BY11 444 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 SLITRK6Q9H5Y7 841 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 RIPK3Q9Y572 518 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 F8VZ95 297 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 CYP24A1Q07973 514 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 BBS9Q3SYG4 887 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 ZNF571Q7Z3V5 609 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-202ENST00000377797 COG1Q8WTW3 980 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 RNF139Q8WU17 664 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 C1orf54Q8WWF1 131 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms