RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 CACNA2D4Q7Z3S7 1137 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 NELFCDQ8IXH7 590 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 CACTIN-AS1Q8N1I8 211 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 CRYGNQ8WXF5 182 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 KLHL29Q96CT2 875 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 NOX5Q96PH1 765 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 SMC6Q96SB8 1091 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 EIF2AQ9BY44 585 aaKnown RBP16.54■□□□□ 0.24
FXN-201ENST00000377270 ZHX3Q9H4I2 956 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 SALL4Q9UJQ4 1053 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 NOVA2Q9UNW9 492 aaKnown RBP16.54■□□□□ 0.24
FXN-201ENST00000377270 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 A0A1W2PRG0 241 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 POTEFA5A3E0 1075 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 TMEM110-MUSTN1A8MSY1 372 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 HSPA8P11142 646 aaKnown RBP16.54■□□□□ 0.24
FXN-201ENST00000377270 ADARP55265 1226 aaKnown RBP16.54■□□□□ 0.24
FXN-201ENST00000377270 DHX9Q08211 1270 aaKnown RBP16.54■□□□□ 0.24
FXN-201ENST00000377270 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
FXN-201ENST00000377270 ZCWPW2Q504Y3 356 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 POTEGQ6S5H5 508 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 MOXD1Q6UVY6 613 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 ISCUQ9H1K1 167 aa16.54■□□□□ 0.24
FXN-201ENST00000377270 YDJCA8MPS7 323 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 PJA2O43164 708 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 WFS1O76024 890 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 UBOX5O94941 541 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 LMNB1P20700 586 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 HOXA13P31271 388 aaPredicted RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 CATSPER3Q86XQ3 398 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 ETNPPLQ8TBG4 499 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 ATP8B4Q8TF62 1192 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 COL4A3BPQ9Y5P4 624 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 TCP10L2B9ZVM9 353 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 E7ENQ6 273 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 FAM86B1E9PN63 330 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 RAD51CO43502 376 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 FAM86B2P0C5J1 330 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 PORP16435 677 aaPredicted RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 EIF4A3P38919 411 aaKnown RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 MAGEA1P43355 309 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 MAGOHP61326 146 aaKnown RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 ITIH4Q14624 930 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 SH3D19Q5HYK7 790 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 GPIHBP1Q8IV16 184 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 RNF10Q8N5U6 811 aaKnown RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 STKLD1Q8NE28 680 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 DQX1Q8TE96 717 aaKnown RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 MAGOHBQ96A72 148 aaKnown RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 CNOT10Q9H9A5 744 aaKnown RBP16.53■□□□□ 0.24
FXN-201ENST00000377270 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.53■□□□□ 0.24
FXN-201ENST00000377270 PCDHA2Q9Y5H9 948 aa16.53■□□□□ 0.24
FXN-201ENST00000377270 ATRNL1Q5VV63 1379 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 MEIS1O00470 390 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 FOSP01100 380 aaPredicted RBP16.52■□□□□ 0.24
FXN-201ENST00000377270 MYBP10242 640 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 CALB2P22676 271 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 SPIRE1Q08AE8 756 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 LRP8Q14114 963 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 RCN2Q14257 317 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 ARSHQ5FYA8 562 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 ERMARDQ5T6L9 678 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 FOXR2Q6PJQ5 311 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 OTUD6AQ7L8S5 288 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 ANKRD13CQ8N6S4 541 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 PDCD7Q8N8D1 485 aaKnown RBP16.52■□□□□ 0.24
FXN-201ENST00000377270 DRC3Q9H069 523 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 RNPEPL1Q9HAU8 725 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 SEL1LQ9UBV2 794 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 CARD8Q9Y2G2 431 aa16.52■□□□□ 0.24
FXN-201ENST00000377270 HOXD10P28358 340 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 ECHS1P30084 290 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 SREBF1P36956 1147 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 TUFMP49411 452 aaKnown RBP16.52■□□□□ 0.23
FXN-201ENST00000377270 CCT8P50990 548 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 SLC12A3P55017 1021 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 PSMC6P62333 389 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 TNNC1P63316 161 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 CUL1Q13616 776 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 BCL2A1Q16548 175 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 MUM1Q2TAK8 710 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 ZC2HC1CQ53FD0 456 aaPredicted RBP16.52■□□□□ 0.23
FXN-201ENST00000377270 ZNF772Q68DY9 489 aaPredicted RBP16.52■□□□□ 0.23
FXN-201ENST00000377270 PHLDB3Q6NSJ2 640 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 CENPTQ96BT3 561 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 XPO6Q96QU8 1125 aaKnown RBP16.52■□□□□ 0.23
FXN-201ENST00000377270 CCDC68Q9H2F9 335 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 ATAD3AQ9NVI7 634 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 PDP2Q9P2J9 529 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.23
FXN-201ENST00000377270 LRRC53A6NM62 1247 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 SLC26A4O43511 780 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 BUB1O43683 1085 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 KLC3Q6P597 504 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 LENG9Q96B70 501 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms