RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 DYNLT1P63172 113 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
USP11-204ENST00000377107 USP37Q86T82 979 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 CLEC4DQ8WXI8 215 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 TBC1D31Q96DN5 1066 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 POLR3FQ9H1D9 316 aaPredicted RBP13.82□□□□□ -0.2
USP11-204ENST00000377107 BAIAP2L1Q9UHR4 511 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 PCDHA10Q9Y5I2 948 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 ZNF536O15090 1300 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 TRAPPC3O43617 180 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 CLTAP09496 248 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 MARK3P27448 753 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 SPRED3Q2MJR0 410 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 ANKS4BQ8N8V4 417 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 SPIRE2Q8WWL2 714 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
USP11-204ENST00000377107 POC1B-GALNT4F8VUJ3 575 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 GOLGA8SH3BPF8 625 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 GOLGA8MH3BSY2 632 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 ATF2P15336 505 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 EIF3BP55884 814 aaKnown RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 PPP2R5EQ16537 467 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 SLC12A6Q9UHW9 1150 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 ANAPC5Q9UJX4 755 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 PODXLO00592 558 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 PIAS1O75925 651 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 CFHP08603 1231 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 KRT10P13645 584 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 CDR2Q01850 454 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 ATP13A4Q4VNC1 1196 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 NBPF12Q5TAG4 269 aaPredicted RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 AGBL2Q5U5Z8 902 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 ZDHHC24Q6UX98 284 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 SRRM1Q8IYB3 904 aaKnown RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 FAM71AQ8IYT1 594 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 CCDC197Q8NCU1 140 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 TMEM161BQ8NDZ6 487 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■■■■ 56.2
USP11-204ENST00000377107 ARHGEF2Q92974 986 aaKnown RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP11-204ENST00000377107 UBE4BO95155 1302 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 RALAP11233 206 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 CTNNA2P26232 953 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 CHKAP35790 457 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 NUGGCQ68CJ6 796 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 HIBCHQ6NVY1 386 aaPredicted RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 MTFR1LQ9H019 292 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 MYOZ2Q9NPC6 264 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 ADAM22Q9P0K1 906 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 ZNF148Q9UQR1 794 aa13.81□□□□□ -0.2
USP11-204ENST00000377107 DIS3Q9Y2L1 958 aaKnown RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.81□□□□□ -0.2
USP11-204ENST00000377107 PPFIA2O75334 1257 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 GAS8O95995 478 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 BYSLQ13895 437 aaKnown RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 SYCP2LQ5T4T6 812 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 FAM47EQ6ZV65 393 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 TBC1D1Q86TI0 1168 aaPredicted RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 HVCN1Q96D96 273 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 WRNIP1Q96S55 665 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 TARS2Q9BW92 718 aaKnown RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 CDC42EP4Q9H3Q1 356 aaKnown RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 TMEM8AQ9HCN3 771 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 PICK1Q9NRD5 415 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 ZDHHC18Q9NUE0 388 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 ARFGEF1Q9Y6D6 1849 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 ZNF862O60290 1169 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 PSMC4P43686 418 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 ITGA8P53708 1063 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 GTF2BQ00403 316 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 POU5F1Q01860 360 aaKnown RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 PRKCEQ02156 737 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 PCNX4Q63HM2 1172 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 DCUN1D2Q6PH85 259 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 SLC9A9Q8IVB4 645 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 GPD1LQ8N335 351 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 PARP2Q9UGN5 583 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 ZNRF3Q9ULT6 936 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 R3HDM2Q9Y2K5 976 aaKnown RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 CNTNAP1P78357 1384 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 ATRNL1Q5VV63 1379 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 SCN9AQ15858 1988 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 K7ERI5 159 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 HLA-DRAP01903 254 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 PTGER2P43116 358 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 KRT76Q01546 638 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 C6orf118Q5T5N4 469 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 ATP6V0A1Q93050 837 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 MOV10L1Q9BXT6 1211 aaKnown RBP13.8□□□□□ -0.2
USP11-204ENST00000377107 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
USP11-204ENST00000377107 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms