RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ZBED3Q96IU2 234 aaPredicted RBP27.1■■□□□ 1.93
C9orf40-201ENST00000376854 LRRC19Q9H756 370 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 ANKEF1Q9NU02 776 aa27.1■■□□□ 1.93
C9orf40-201ENST00000376854 DENND3A2RUS2 1198 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 WDR64B1ANS9 1081 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 CCNE2O96020 404 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 CALCOCO2Q13137 446 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 LLGL1Q15334 1064 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 CCDC25Q86WR0 208 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 NIM1KQ8IY84 436 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 PSPC1Q8WXF1 523 aaKnown RBP27.09■■□□□ 1.93
C9orf40-201ENST00000376854 RGPD3A6NKT7 1758 aaPredicted RBP27.09■■□□□ 1.93
C9orf40-201ENST00000376854 RGPD4Q7Z3J3 1758 aa27.09■■□□□ 1.93
C9orf40-201ENST00000376854 RASGRF2O14827 1237 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 RPS6P62753 249 aaKnown RBP27.08■■□□□ 1.93
C9orf40-201ENST00000376854 TMC2Q8TDI7 906 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 HVCN1Q96D96 273 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 PLVAPQ9BX97 442 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 STMN4Q9H169 189 aaPredicted RBP27.08■■□□□ 1.93
C9orf40-201ENST00000376854 GRIN3BO60391 1043 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 CHADLQ6NUI6 762 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 AGBL3Q8NEM8 1001 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 KMT5AQ9NQR1 393 aa27.08■■□□□ 1.93
C9orf40-201ENST00000376854 INTS9Q9NV88 658 aaKnown RBP27.08■■□□□ 1.93
C9orf40-201ENST00000376854 WDR46O15213 610 aaKnown RBP27.07■■□□□ 1.92
C9orf40-201ENST00000376854 RASSF9O75901 435 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 EGFRP00533 1210 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 KRT5P13647 590 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 SFNP31947 248 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 C1orf54Q8WWF1 131 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 MFSD14AQ96MC6 490 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 SLC40A1Q9NP59 571 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 FSCN2O14926 492 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 MAP3K10Q02779 954 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 CLEC16AQ2KHT3 1053 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 SGO2Q562F6 1265 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 SWT1Q5T5J6 900 aaKnown RBP27.07■■□□□ 1.92
C9orf40-201ENST00000376854 SV2AQ7L0J3 742 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 P3H4Q92791 437 aa27.07■■□□□ 1.92
C9orf40-201ENST00000376854 KRT76Q01546 638 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 AUHQ13825 339 aaKnown RBP27.06■■□□□ 1.92
C9orf40-201ENST00000376854 LACTB2Q53H82 288 aaPredicted RBP27.06■■□□□ 1.92
C9orf40-201ENST00000376854 ANO5Q75V66 913 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 CCDC197Q8NCU1 140 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 POMGNT1Q8WZA1 660 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 CCT6BQ92526 530 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 SLC38A10Q9HBR0 1119 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 KLC4Q9NSK0 619 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 MAP3K20Q9NYL2 800 aaKnown RBP27.06■■□□□ 1.92
C9orf40-201ENST00000376854 ANAPC7Q9UJX3 599 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 MAPK4P31152 587 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 GTF2H1P32780 548 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 KRT17Q04695 432 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 CYP24A1Q07973 514 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 MKRN4PQ13434 485 aaPredicted RBP27.06■■□□□ 1.92
C9orf40-201ENST00000376854 SLC39A4Q6P5W5 647 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 USP37Q86T82 979 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 BSNDQ8WZ55 320 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 SLCO2A1Q92959 643 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 FBXL18Q96ME1 805 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 RMDN3Q96TC7 470 aa27.06■■□□□ 1.92
C9orf40-201ENST00000376854 TESPA1A2RU30 521 aaPredicted RBP27.05■■□□□ 1.92
C9orf40-201ENST00000376854 CALCAP01258 141 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 SNX1Q13596 522 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 TNFAIP8L3Q5GJ75 292 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 TRMT10CQ7L0Y3 403 aaKnown RBP27.05■■□□□ 1.92
C9orf40-201ENST00000376854 PRMT1Q99873 361 aaKnown RBP27.05■■□□□ 1.92
C9orf40-201ENST00000376854 CCDC113Q9H0I3 377 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 KDM4CQ9H3R0 1056 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 MYOZ2Q9NPC6 264 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 ASAP2O43150 1006 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 ATP2C2O75185 946 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 SCTRP47872 440 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 LPAR1Q92633 364 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 PI4K2AQ9BTU6 479 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 WHRNQ9P202 907 aa27.05■■□□□ 1.92
C9orf40-201ENST00000376854 TAOK1Q7L7X3 1001 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 ANKS4BQ8N8V4 417 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 PDCD2LQ9BRP1 358 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 UTRNP46939 3433 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 SOX10P56693 466 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 MFSD5Q6N075 450 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 LRRC34Q8IZ02 419 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 JPH2Q9BR39 696 aaPredicted RBP27.04■■□□□ 1.92
C9orf40-201ENST00000376854 DDX23Q9BUQ8 820 aaKnown RBP27.04■■□□□ 1.92
C9orf40-201ENST00000376854 ROPN1BQ9BZX4 212 aaPredicted RBP27.04■■□□□ 1.92
C9orf40-201ENST00000376854 CDC42EP4Q9H3Q1 356 aaKnown RBP27.04■■□□□ 1.92
C9orf40-201ENST00000376854 ROPN1Q9HAT0 212 aaPredicted RBP27.04■■□□□ 1.92
C9orf40-201ENST00000376854 ASIC3Q9UHC3 531 aa27.04■■□□□ 1.92
C9orf40-201ENST00000376854 ZNF568Q3ZCX4 644 aa27.03■■□□□ 1.92
C9orf40-201ENST00000376854 CCDC38Q502W7 563 aa27.03■■□□□ 1.92
C9orf40-201ENST00000376854 SPIRE2Q8WWL2 714 aa27.03■■□□□ 1.92
C9orf40-201ENST00000376854 NTPCRQ9BSD7 190 aaKnown RBP27.03■■□□□ 1.92
C9orf40-201ENST00000376854 CCDC134Q9H6E4 229 aa27.03■■□□□ 1.92
C9orf40-201ENST00000376854 PXMP2Q9NR77 195 aa27.03■■□□□ 1.92
C9orf40-201ENST00000376854 TP73O15350 636 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 SCP2P22307 547 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 GCNT1Q02742 428 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 ARHGEF16Q5VV41 709 aa27.02■■□□□ 1.92
C9orf40-201ENST00000376854 CEP170P1Q96L14 293 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms