RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MTSS1LQ765P7 747 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 IGSF22Q8N9C0 903 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 BSNDQ8WZ55 320 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 ZNF707Q96C28 371 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-204ENST00000376643 MRPL4Q9BYD3 311 aaKnown RBP16.22■□□□□ 0.19
HDAC6-204ENST00000376643 TMEM134Q9H6X4 195 aa16.22■□□□□ 0.19
HDAC6-204ENST00000376643 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
HDAC6-204ENST00000376643 CCDC169A6NNP5 214 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 F8W810 466 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 H0Y858 1186 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 B3GAT3O94766 335 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 FSHRP23945 695 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 PTGDRQ13258 359 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 RILPL1Q5EBL4 403 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 RTP2Q5QGT7 225 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 DTHD1Q6ZMT9 781 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 ANKS3Q6ZW76 656 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 GET4Q7L5D6 327 aaPredicted RBP16.21■□□□□ 0.19
HDAC6-204ENST00000376643 GLYCTKQ8IVS8 523 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 SIX5Q8N196 739 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 GDAQ9Y2T3 454 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 MYO10Q9HD67 2058 aa16.21■□□□□ 0.19
HDAC6-204ENST00000376643 H0YCG3 227 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 STK25O00506 426 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 C8AP07357 584 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 SPATA31D3P0C874 917 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 LAMP2P13473 410 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 NBL1P41271 181 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 GRM5P41594 1212 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 ZNF568Q3ZCX4 644 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 PRSS55Q6UWB4 352 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-204ENST00000376643 SPATA31D4Q6ZUB0 917 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 LNX1Q8TBB1 728 aaPredicted RBP16.2■□□□□ 0.18
HDAC6-204ENST00000376643 HASPINQ8TF76 798 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 SHDQ96IW2 340 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 B3GALT6Q96L58 329 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 SMOC2Q9H3U7 446 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 KMT5AQ9NQR1 393 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 KCND2Q9NZV8 630 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 BACE2Q9Y5Z0 518 aa16.2■□□□□ 0.18
HDAC6-204ENST00000376643 RPL17P18621 184 aaKnown RBP16.19■□□□□ 0.18
HDAC6-204ENST00000376643 SCP2P22307 547 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 FGFR3P22607 806 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 SMTNP53814 917 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 PEX3P56589 373 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 STRN3Q13033 797 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 RAB33AQ14088 237 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 RABEP1Q15276 862 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 CWF19L1Q69YN2 538 aaKnown RBP16.19■□□□□ 0.18
HDAC6-204ENST00000376643 CCDC105Q8IYK2 499 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 SLC44A3Q8N4M1 653 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 C4orf32Q8N8J7 132 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 PPP1R10Q96QC0 940 aaKnown RBP16.19■□□□□ 0.18
HDAC6-204ENST00000376643 MYADMQ96S97 322 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 PHOX2BQ99453 314 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 CLSTN3Q9BQT9 956 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 PAAF1Q9BRP4 392 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 TCHPQ9BT92 498 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 UPF2Q9HAU5 1272 aaKnown RBP16.19■□□□□ 0.18
HDAC6-204ENST00000376643 SLC2A4RGQ9NR83 387 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 FAM86C1Q9NVL1 165 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 CDH7Q9ULB5 785 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 KCNH3Q9ULD8 1083 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 WDFY4Q6ZS81 3184 aa16.19■□□□□ 0.18
HDAC6-204ENST00000376643 C2orf16Q68DN1 1984 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 ANHXE9PGG2 379 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 SLC26A4O43511 780 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 N4BP1O75113 896 aaKnown RBP16.18■□□□□ 0.18
HDAC6-204ENST00000376643 SEC24BO95487 1268 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 CENPBP07199 599 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-204ENST00000376643 CFHP08603 1231 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 MCF2P10911 925 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 NPTX2P47972 431 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 NAB2Q15742 525 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 PHLDB3Q6NSJ2 640 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 RABGGTAQ92696 567 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 NKD2Q969F2 451 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-204ENST00000376643 CDK5RAP3Q96JB5 506 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 ACAP3Q96P50 834 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 KIFC3Q9BVG8 833 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 SEMA4AQ9H3S1 761 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 ARHGAP28Q9P2N2 729 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 MTRRQ9UBK8 725 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 PLXNA3P51805 1871 aa16.18■□□□□ 0.18
HDAC6-204ENST00000376643 TTLL13PA6NNM8 815 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 H7C4K7 107 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 SYN3O14994 580 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 HIP1RO75146 1068 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 MYBP10242 640 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 GUCY2CP25092 1073 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 ELF1P32519 619 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 RPL9P32969 192 aaKnown RBP16.17■□□□□ 0.18
HDAC6-204ENST00000376643 MCM2P49736 904 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 PFKPQ01813 784 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 HTR4Q13639 388 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 UPP1Q16831 310 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 AXDND1Q5T1B0 1012 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-204ENST00000376643 NT5DC1Q5TFE4 455 aa16.17■□□□□ 0.18
HDAC6-204ENST00000376643 MPZL3Q6UWV2 235 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms