RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 RUNDC3BQ96NL0 473 aa12.28□□□□□ -0.44
TM9SF2-201ENST00000376387 FIZ1Q96SL8 496 aa12.28□□□□□ -0.44
TM9SF2-201ENST00000376387 LBHD1Q9BQE6 289 aaPredicted RBP12.28□□□□□ -0.44
TM9SF2-201ENST00000376387 SLCO1B3Q9NPD5 702 aa12.28□□□□□ -0.44
TM9SF2-201ENST00000376387 AGPAT3Q9NRZ7 376 aa12.28□□□□□ -0.44
TM9SF2-201ENST00000376387 NAALADL1Q9UQQ1 740 aa12.28□□□□□ -0.44
TM9SF2-201ENST00000376387 COL5A3P25940 1745 aaPredicted RBP12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 CHMP2AO43633 222 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 SPOPO43791 374 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 TTC4O95801 387 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 CALCAP01258 141 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 HOXA13P31271 388 aaPredicted RBP12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 ITGA8P53708 1063 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 MTFR1Q15390 333 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 TAOK3Q9H2K8 898 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 PCIF1Q9H4Z3 704 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 PIDD1Q9HB75 910 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 SPATS2LQ9NUQ6 558 aaKnown RBP12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 NINJ2Q9NZG7 142 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 CHKBQ9Y259 395 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 PLIN4Q96Q06 1357 aa12.27□□□□□ -0.44
TM9SF2-201ENST00000376387 DYTNA2CJ06 578 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 FAM196BA6NMK8 535 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 KIF3CO14782 793 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 FAM13AO94988 1023 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 CSPG5O95196 566 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 HSPA6P17066 643 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 IVDP26440 423 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 RAD23BP54727 409 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 HADHBP55084 474 aaKnown RBP12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 DNAJC3Q13217 504 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 RNF43Q68DV7 783 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 PHLDB2Q86SQ0 1253 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 TMEM110Q86TL2 294 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 NOP9Q86U38 636 aaKnown RBP12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 TPH2Q8IWU9 490 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 ERMNQ8TAM6 284 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 C9orf72Q96LT7 481 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 PITPNM3Q9BZ71 974 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 KIAA1683Q9H0B3 1180 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 GBP1P32455 592 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 SHMT1P34896 483 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 CTCFP49711 727 aaPredicted RBP12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 ZNF449Q6P9G9 518 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 FAM13CQ8NE31 585 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 MAGEB18Q96M61 343 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 NUP85Q9BW27 656 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 NYXQ9GZU5 481 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 OLFML3Q9NRN5 406 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 ETAA1Q9NY74 926 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 GRID1Q9ULK0 1009 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 DAGLAQ9Y4D2 1042 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 SMCHD1A6NHR9 2005 aa12.27□□□□□ -0.45
TM9SF2-201ENST00000376387 THAP12O43422 761 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 EYA4O95677 639 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 BDNFP23560 247 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 EPHB2P29323 1055 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 PPP3CAQ08209 521 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 SLC47A2Q86VL8 602 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 RPS6KC1Q96S38 1066 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 MTUS1Q9ULD2 1270 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 SRCAPQ6ZRS2 3230 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 HIP1RO75146 1068 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 ENTPD5O75356 428 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 CBX6O95503 412 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 TPBGLP0DKB5 382 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 T-ENOLP0DO92 83 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 C1orf186Q6ZWK4 172 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 OGFOD1Q8N543 542 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 ZNF564Q8TBZ8 553 aaPredicted RBP12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 RNPEPL1Q9HAU8 725 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 WRAP73Q9P2S5 460 aaPredicted RBP12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 R3HDM2Q9Y2K5 976 aaKnown RBP12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 NUMBLQ9Y6R0 609 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 SPATA31A5Q5VU36 1347 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 EMSYQ7Z589 1322 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 SPATA31A7Q8IWB4 1347 aa12.26□□□□□ -0.45
TM9SF2-201ENST00000376387 UFL1O94874 794 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 GCLMP48507 274 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 BFSP1Q12934 665 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 SGO2Q562F6 1265 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 LONP2Q86WA8 852 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 VSIG1Q86XK7 387 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 PSPC1Q8WXF1 523 aaKnown RBP12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 DYDC2Q96IM9 177 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 SYT15Q9BQS2 421 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 WNT8AQ9H1J5 351 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 LRRC19Q9H756 370 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 DMAC2Q9NW81 257 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 MKS1Q9NXB0 559 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 LRRC42Q9Y546 428 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 EXOC3O60645 756 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 GGPS1O95749 300 aa12.25□□□□□ -0.45
TM9SF2-201ENST00000376387 CALB2P22676 271 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 328.2 ms