RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 LIMA1Q9UHB6 759 aaKnown RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 ADGRL2O95490 1459 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 ATMINO43313 823 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 KRT7P08729 469 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 HMGCS2P54868 508 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 ITPRIPL1Q6GPH6 555 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 KLF6Q99612 283 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 DCP1AQ9NPI6 582 aaPredicted RBP14.46□□□□□ -0.09
COL4A1-201ENST00000375820 ZFATQ9P243 1243 aa14.46□□□□□ -0.09
COL4A1-201ENST00000375820 UTYO14607 1347 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 AKAP10O43572 662 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 PGM1P36871 562 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 WDR72Q3MJ13 1102 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 ANO5Q75V66 913 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 DGKHQ86XP1 1220 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 OR6J1Q8NGC5 347 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 OR2W6PQ8NHA6 318 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 COG1Q8WTW3 980 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 PABPC5Q96DU9 382 aaKnown RBP14.46□□□□□ -0.1
COL4A1-201ENST00000375820 LRRC1Q9BTT6 524 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 KIAA1586Q9HCI6 787 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 PCMTD2Q9NV79 361 aa14.46□□□□□ -0.1
COL4A1-201ENST00000375820 ERVV-1B6SEH8 477 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 YWHABP31946 246 aaKnown RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 TERF2Q15554 542 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 NBPF20Q3BBV1 942 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 PRAMEF18Q5VWM3 479 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 NBPF10Q6P3W6 841 aaKnown RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 SEPT5Q99719 369 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 KRT4P19013 534 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 MAGEA9P43362 315 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 NEK2P51955 445 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 MTMR2Q13614 643 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 CCDC157Q569K6 752 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 DEPDC1Q5TB30 811 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 ACSF2Q96CM8 615 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 ASCC2Q9H1I8 757 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 DNMT1P26358 1616 aaKnown RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 ANGPT2O15123 496 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 KDM1AO60341 852 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 CCDC159P0C7I6 412 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 MAP4P27816 1152 aaKnown RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 PLIN5Q00G26 463 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 KRT76Q01546 638 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 LAYNQ6UX15 382 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 MCEEQ96PE7 176 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 IRX2Q9BZI1 471 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 MUC3BQ9H195 1237 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 ZSCAN32Q9NX65 697 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 STOML1Q9UBI4 398 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 IGSF1Q8N6C5 1336 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 RALAP11233 206 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 SCP2P22307 547 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 SMTNL2Q2TAL5 461 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 SRPK1Q96SB4 655 aaKnown RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 SHCBP1LQ9BZQ2 653 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 AGAP1Q9UPQ3 857 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 SNX9Q9Y5X1 595 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 DDHD2O94830 711 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 ZNF772Q68DY9 489 aaPredicted RBP14.45□□□□□ -0.1
COL4A1-201ENST00000375820 CCDC33Q8N5R6 958 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 SNX31Q8N9S9 440 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 APOL5Q9BWW9 433 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 TMEM117Q9H0C3 514 aa14.45□□□□□ -0.1
COL4A1-201ENST00000375820 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 MRPS15P82914 257 aaKnown RBP14.44□□□□□ -0.1
COL4A1-201ENST00000375820 HS6ST3Q8IZP7 471 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 RNPC3Q96LT9 517 aaKnown RBP14.44□□□□□ -0.1
COL4A1-201ENST00000375820 AGPAT1Q99943 283 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 WNT8AQ9H1J5 351 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 EML4Q9HC35 981 aaKnown RBP14.44□□□□□ -0.1
COL4A1-201ENST00000375820 PNMA8BQ9ULN7 279 aaPredicted RBP14.44□□□□□ -0.1
COL4A1-201ENST00000375820 SUPT3HB4E1H0 165 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 IL10P22301 178 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 ATP6V1G3Q96LB4 118 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 KDM4CQ9H3R0 1056 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 RAD18Q9NS91 495 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 DDX56Q9NY93 547 aaKnown RBP14.44□□□□□ -0.1
COL4A1-201ENST00000375820 CPDO75976 1380 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 PRR23AA6NEV1 266 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 C5orf58C9J3I9 102 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 ASAP2O43150 1006 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 AKR1B1P15121 316 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 PROM2Q8N271 834 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 MXD3Q9BW11 206 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 DONSONQ9NYP3 566 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 IMPDH2P12268 514 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 SOAT1P35610 550 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 CAV1Q03135 178 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 RABGAP1LQ5R372 815 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 LONP2Q86WA8 852 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 FMR1NBQ8N0W7 255 aaPredicted RBP14.44□□□□□ -0.1
COL4A1-201ENST00000375820 CLEC4FQ8N1N0 589 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 TRABDQ9H4I3 376 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 CACNA2D2Q9NY47 1150 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 EPB42P16452 691 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 ACTR2P61160 394 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 HIC1Q14526 733 aa14.44□□□□□ -0.1
COL4A1-201ENST00000375820 ANGPT1Q15389 498 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms