RNA–Protein interactions for RNA: ENST00000375780.6

CLIC1-207, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-207ENST00000375780 CUL4BQ13620 913 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 CAMK1Q14012 370 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
CLIC1-207ENST00000375780 POSTNQ15063 836 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 CCDC85BQ15834 202 aaPredicted RBP13.04□□□□□ -0.32
CLIC1-207ENST00000375780 KANK3Q6NY19 840 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 SYAP1Q96A49 352 aaPredicted RBP13.04□□□□□ -0.32
CLIC1-207ENST00000375780 SNX27Q96L92 541 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 MSTO1Q9BUK6 570 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 BLZF1Q9H2G9 400 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 NGRNQ9NPE2 291 aaKnown RBP13.04□□□□□ -0.32
CLIC1-207ENST00000375780 SLC38A7Q9NVC3 462 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.04□□□□□ -0.32
CLIC1-207ENST00000375780 STYXL1Q9Y6J8 313 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 UBE4BO95155 1302 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 REV3LO60673 3130 aa13.04□□□□□ -0.32
CLIC1-207ENST00000375780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 NRP1O14786 923 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 MYBP10242 640 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 DNAJB1P25685 340 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 OR1G1P47890 313 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 CASP5P51878 434 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 SLC39A4Q6P5W5 647 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 DDX53Q86TM3 631 aaKnown RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 GRAMD1CQ8IYS0 662 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 CCDC47Q96A33 483 aaKnown RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 HAPLN2Q9GZV7 340 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 PLEKHA5Q9HAU0 1116 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 NCK2O43639 380 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 KCNE1P15382 129 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 CASP1P29466 404 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 POU5F1Q01860 360 aaKnown RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 SKIV2LQ15477 1246 aaKnown RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 CCDC183Q5T5S1 534 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 ALKAL1Q6UXT8 129 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 TMEM173Q86WV6 379 aaPredicted RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 MICAL1Q8TDZ2 1067 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 POMGNT1Q8WZA1 660 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 PPP1R10Q96QC0 940 aaKnown RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 TSPAN18Q96SJ8 248 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 FGFBP2Q9BYJ0 223 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 ENTPD7Q9NQZ7 604 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
CLIC1-207ENST00000375780 PRG3Q9Y2Y8 225 aaPredicted RBP13.03□□□□□ -0.32
CLIC1-207ENST00000375780 SMIM28A0A1B0GU29 152 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 SYCE3A1L190 88 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 ANKRD63C9JTQ0 380 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 FSCN2O14926 492 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 KIAA0391O15091 583 aaKnown RBP13.02□□□□□ -0.33
CLIC1-207ENST00000375780 FAM189A1O60320 539 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 PRPF6O94906 941 aaKnown RBP13.02□□□□□ -0.33
CLIC1-207ENST00000375780 GARTP22102 1010 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 KCNA1Q09470 495 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 PSMD2Q13200 908 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 SMC1AQ14683 1233 aaKnown RBP13.02□□□□□ -0.33
CLIC1-207ENST00000375780 NAB2Q15742 525 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 TCEAL5Q5H9L2 206 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 GLRA4Q5JXX5 417 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 EPM2AIP1Q7L775 607 aaPredicted RBP13.02□□□□□ -0.33
CLIC1-207ENST00000375780 TMC7Q7Z402 723 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
CLIC1-207ENST00000375780 UROC1Q96N76 676 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.33
CLIC1-207ENST00000375780 MARCH5Q9NX47 278 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 AGO2Q9UKV8 859 aaKnown RBP13.02□□□□□ -0.33
CLIC1-207ENST00000375780 COG5Q9UP83 839 aa13.02□□□□□ -0.33
CLIC1-207ENST00000375780 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 KLRC4O43908 158 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 CSPG5O95196 566 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 LDHAP00338 332 aaKnown RBP13.01□□□□□ -0.33
CLIC1-207ENST00000375780 CXCL8P10145 99 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 IRS1P35568 1242 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 ERVFC1P60507 584 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 HSP90AA2PQ14568 343 aaPredicted RBP13.01□□□□□ -0.33
CLIC1-207ENST00000375780 SLC10A6Q3KNW5 377 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 SEZ6Q53EL9 994 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 CD302Q8IX05 232 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 BCL7CQ8WUZ0 217 aaPredicted RBP13.01□□□□□ -0.33
CLIC1-207ENST00000375780 HPS3Q969F9 1004 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 CDCA3Q99618 268 aaPredicted RBP13.01□□□□□ -0.33
CLIC1-207ENST00000375780 ZBP1Q9H171 429 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 HOOK1Q9UJC3 728 aaKnown RBP13.01□□□□□ -0.33
CLIC1-207ENST00000375780 CPSF3Q9UKF6 684 aaKnown RBP13.01□□□□□ -0.33
CLIC1-207ENST00000375780 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
CLIC1-207ENST00000375780 SF3B1O75533 1304 aaKnown RBP eCLIP13□□□□□ -0.338e-6■■■■■ 107
CLIC1-207ENST00000375780 CASTOR2A6NHX0 329 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms