RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 AGO2Q9UKV8 859 aaKnown RBP22.39■■□□□ 1.18
TGFBR1-202ENST00000374994 PHKA2P46019 1235 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 ZNF677Q86XU0 584 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 POLD4Q9HCU8 107 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 NYAP2Q9P242 653 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 CPSF3Q9UKF6 684 aaKnown RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 LOC102724159A0A0B4J2E5 919 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 RPA1P27694 616 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 PWP2Q15269 919 aaKnown RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 BARGINQ6ZT62 677 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 ACTRT1Q8TDG2 376 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 TOPORSQ9NS56 1045 aaPredicted RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 M0QYV0 167 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 TYK2P29597 1187 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 NT5DC1Q5TFE4 455 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 TTI2Q6NXR4 508 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 TRIM65Q6PJ69 517 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 KBTBD4Q9NVX7 518 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 L3MBTL1Q9Y468 752 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 ECM2O94769 699 aaPredicted RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 COMTP21964 271 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 KLK7P49862 253 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 KIF19Q2TAC6 998 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 PRPF38AQ8NAV1 312 aaKnown RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 MRPL4Q9BYD3 311 aaKnown RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 POLR3FQ9H1D9 316 aaPredicted RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 HERC5Q9UII4 1024 aaKnown RBP22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 PCDHA10Q9Y5I2 948 aa22.39■■□□□ 1.17
TGFBR1-202ENST00000374994 INPP1P49441 399 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 RASSF3Q86WH2 238 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 SLC27A3Q5K4L6 730 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 MTHFD1LQ6UB35 978 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 DDX42Q86XP3 938 aaKnown RBP eCLIP22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 NLRP4Q96MN2 994 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 VCPKMTQ9H867 229 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 KRT82Q9NSB4 513 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 NAGPAQ9UK23 515 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 NPHP3-ACAD11A0A0J9YXS1 232 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 PPARGP37231 505 aaPredicted RBP22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 FAM47CQ5HY64 1035 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 DAB2IPQ5VWQ8 1189 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 GRAMD4Q6IC98 578 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 C16orf86Q6ZW13 317 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 KCNK16Q96T55 309 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 CCDC195A0A1B0GUA6 201 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 MAPK7Q13164 816 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 ZNF568Q3ZCX4 644 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 ZNF302Q9NR11 478 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 GABBR1Q9UBS5 961 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 GTF3C4Q9UKN8 822 aa22.38■■□□□ 1.17
TGFBR1-202ENST00000374994 CAMSAP1Q5T5Y3 1602 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 PMLP29590 882 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 COILP38432 576 aaPredicted RBP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 EFNA5P52803 228 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 SLC29A2Q14542 456 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 C9orf72Q96LT7 481 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 ABL1P00519 1130 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 MAGEA4P43358 317 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 DUOXA2Q1HG44 320 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 FRMD8Q9BZ67 464 aaPredicted RBP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 MAGEB5Q9BZ81 275 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 EIF3EP60228 445 aaKnown RBP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 EFTUD2Q15029 972 aaKnown RBP eCLIP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 KYAT1Q16773 422 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 DCPSQ96C86 337 aaKnown RBP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 TYW5A2RUC4 315 aaKnown RBP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 O00370 1275 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 TBX2Q13207 712 aaPredicted RBP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 TMCO4Q5TGY1 634 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 PIK3R2O00459 728 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 PIGHQ14442 188 aaPredicted RBP22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 RTKN2Q8IZC4 609 aa22.37■■□□□ 1.17
TGFBR1-202ENST00000374994 RNF103-CHMP3A0A140T963 221 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 IGF2BP3O00425 579 aaKnown RBP eCLIP22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 KLHL2O95198 593 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 HERVK_113P62684 666 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 MYLK4Q86YV6 388 aaPredicted RBP22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 TRPC5Q9UL62 973 aaPredicted RBP22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 CDH6P55285 790 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 KYNUQ16719 465 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 TTC8Q8TAM2 541 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 OSBPL8Q9BZF1 889 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 SLC13A1Q9BZW2 595 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 ZNF408Q9H9D4 720 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 RGL1Q9NZL6 768 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 PCDHB2Q9Y5E7 798 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 PPRC1Q5VV67 1664 aaKnown RBP22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 A0A0G2JLW4 131 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 TOB1P50616 345 aaPredicted RBP22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 CRYMQ14894 314 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 HP1BP3Q5SSJ5 553 aaPredicted RBP22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 POTEAQ6S8J7 498 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 GTSE1Q9NYZ3 720 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 AP3B1O00203 1094 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 RASA1P20936 1047 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 MAGED2Q9UNF1 606 aaPredicted RBP22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 CAPN6Q9Y6Q1 641 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 RNF139Q8WU17 664 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 SNX5Q9Y5X3 404 aa22.36■■□□□ 1.17
TGFBR1-202ENST00000374994 A0A0A6YYK5 440 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms