RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 KRT17Q04695 432 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SMC1AQ14683 1233 aaKnown RBP11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PLA2G4FQ68DD2 849 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FAM43BQ6ZT52 329 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SFR1Q86XK3 245 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SLC39A11Q8N1S5 342 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KIAA0895Q8NCT3 520 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 HELQQ8TDG4 1101 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FAM167AQ96KS9 214 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RIPOR3Q96MK2 946 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SCLT1Q96NL6 688 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MED15Q96RN5 788 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ADAMTS10Q9H324 1103 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PARVGQ9HBI0 331 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 POLD4Q9HCU8 107 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CYP26B1Q9NR63 512 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FANCLQ9NW38 375 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SPG21Q9NZD8 308 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TBC1D7Q9P0N9 293 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SEL1LQ9UBV2 794 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NR2E1Q9Y466 385 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NFE2L3Q9Y4A8 694 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PPME1Q9Y570 386 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MYO15AQ9UKN7 3530 aa11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PTPRZ1P23471 2315 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GVINP1Q7Z2Y8 2422 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TMEM150BA6NC51 233 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NT5C1B-RDH14C9J2C7 533 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GALR2O43603 387 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 USO1O60763 962 aaKnown RBP11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 DGAT1O75907 488 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ASGR2P07307 311 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZSCAN20P17040 1043 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CDK11BP21127 795 aaKnown RBP11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RARS2Q5T160 578 aaKnown RBP11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CENPPQ6IPU0 288 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CES5AQ6NT32 575 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 EFCAB12Q6NXP0 572 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SARM1Q6SZW1 724 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MAEAQ7L5Y9 396 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 EXOC8Q8IYI6 725 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 C12orf76Q8N812 135 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TMEM105Q8N8V8 129 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 FEZF2Q8TBJ5 459 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 AUTS2Q8WXX7 1259 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 DRC1Q96MC2 740 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SH2D3AQ9BRG2 576 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ADAM7Q9H2U9 754 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 OLFML3Q9NRN5 406 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SORCS3Q9UPU3 1222 aa11.97□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MAGEB2O15479 319 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 AP5Z1O43299 807 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ADCY5O95622 1261 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MAPTP10636 758 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PLS3P13797 630 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 DARSP14868 501 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 EIF4BP23588 611 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RFC5P40937 340 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GPC3P51654 580 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CCDC173Q0VFZ6 552 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MAPK7Q13164 816 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MTERF2Q49AM1 385 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 EPM2AIP1Q7L775 607 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ASCL5Q7RTU5 278 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZNF598Q86UK7 904 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TMEM173Q86WV6 379 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MRPL43Q8N983 215 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TDRD5Q8NAT2 981 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MCPH1Q8NEM0 835 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZNF507Q8TCN5 953 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NOC3LQ8WTT2 800 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NLRP7Q8WX94 980 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KIFAP3Q92845 792 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NECTIN4Q96NY8 510 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TSG101Q99816 390 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 TRIM5Q9C035 493 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 HSD3B7Q9H2F3 369 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MRPL44Q9H9J2 332 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 LARSQ9P2J5 1176 aaKnown RBP11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KCNG1Q9UIX4 513 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
HLA-DQA1-202ENST00000374949 C2orf16Q68DN1 1984 aa11.96□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZC3H11AO75152 810 aaKnown RBP eCLIP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CSDE1O75534 798 aaKnown RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FGFR1OPO95684 399 aaKnown RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 EPCAMP16422 314 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 BCAR1P56945 870 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ITIH3Q06033 890 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DRP2Q13474 957 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TARBP2Q15633 366 aaKnown RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FOXR2Q6PJQ5 311 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZNF720Q7Z2F6 126 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 UBALD2Q8IYN6 164 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DAW1Q8N136 415 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GLIS3Q8NEA6 775 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms