RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 OGTO15294 1046 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SGPL1O95470 568 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ITGBL1O95965 494 aaPredicted RBP19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 GZMAP12544 262 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 INSRRP14616 1297 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CHRNB2P17787 502 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 NOP2P46087 812 aaKnown RBP19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 HADHBP55084 474 aaKnown RBP19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TSHZ1Q6ZSZ6 1077 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 NOP9Q86U38 636 aaKnown RBP19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 DNAAF5Q86Y56 855 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PALB2Q86YC2 1186 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MMGT1Q8N4V1 131 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 HNRNPLLQ8WVV9 542 aaKnown RBP19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TATDN2Q93075 761 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 C16orf70Q9BSU1 422 aa19.39■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TARSL2A2RTX5 802 aaKnown RBP19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CYP26A1O43174 497 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 VNN1O95497 513 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 USP8P40818 1118 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PIK3CAP42336 1068 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CLCN3P51790 818 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 HUNKP57058 714 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SURF1Q15526 300 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 WDR44Q5JSH3 913 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 IQSEC1Q6DN90 963 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CC2D1AQ6P1N0 951 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 WDR93Q6P2C0 686 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RASAL3Q86YV0 1011 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 DHX38Q92620 1227 aaKnown RBP19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PNKPQ96T60 521 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PTPRHQ9HD43 1115 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TAS2R14Q9NYV8 317 aa19.38■□□□□ 0.69
HLA-DQB1-201ENST00000374943 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MANSC4A6NHS7 340 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ATP8B1O43520 1251 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RTN2O75298 545 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 KIF4AO95239 1232 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CYP11B1P15538 503 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SMPD1P17405 629 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PAFAH1B1P43034 410 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PDE6CP51160 858 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CDR2Q01850 454 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MBTD1Q05BQ5 628 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ACVR2BQ13705 512 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 FAM187BQ17R55 369 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MORN1Q5T089 497 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 LMBRD2Q68DH5 695 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SMYD5Q6GMV2 418 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MPZL3Q6UWV2 235 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SLC47A2Q86VL8 602 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 WDR49Q8IV35 697 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RHOT2Q8IXI1 618 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 NPLOC4Q8TAT6 608 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SEPT11Q9NVA2 429 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 STXBP5LQ9Y2K9 1186 aa19.37■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TMCO5BA8MYB1 307 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RHOXF2BP0C7M4 288 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CXCR5P32302 372 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 FMO1Q01740 532 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 BIRC3Q13489 604 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RPS6KA1Q15418 735 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CFAP221Q4G0U5 840 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CCDC181Q5TID7 509 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SPATA4Q8NEY3 305 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SLC35G2Q8TBE7 412 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 DDX1Q92499 740 aaKnown RBP19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 NLRP4Q96MN2 994 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RHOXF2Q9BQY4 288 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PI4K2AQ9BTU6 479 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CPSF3Q9UKF6 684 aaKnown RBP19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MMP3P08254 477 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PHKA2P46019 1235 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ATF7IP2Q5U623 682 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 CHADLQ6NUI6 762 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 METTL13Q8N6R0 699 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 SMC1BQ8NDV3 1235 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 RUBCNQ92622 972 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TAF4BQ92750 862 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PBKQ96KB5 322 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PCDHB18PQ96TA0 734 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PSMB7Q99436 277 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 THAP2Q9H0W7 228 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ABCB6Q9NP58 842 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ARFGAP3Q9NP61 516 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 PRMT7Q9NVM4 692 aaPredicted RBP19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 FAM53CQ9NYF3 392 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 TNFSF13BQ9Y275 285 aa19.36■□□□□ 0.69
HLA-DQB1-201ENST00000374943 H3BRB1 525 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 IGF2BP3O00425 579 aaKnown RBP eCLIP19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ZNF286BP0CG31 522 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 HARSP12081 509 aaKnown RBP19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 MCM3P25205 808 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 C2orf54Q08AI8 447 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ZNF677Q86XU0 584 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 OR6J1Q8NGC5 347 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 OR5B17Q8NGF7 314 aa19.35■□□□□ 0.69
HLA-DQB1-201ENST00000374943 ARHGEF26Q96DR7 871 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms