RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 GPC5P78333 572 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 AP3B2Q13367 1082 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 C11orf63Q6NUN7 778 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 BZW1Q7L1Q6 419 aaKnown RBP11.87□□□□□ -0.51
CCDC40-203ENST00000374877 ERICH1Q86X53 443 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 FAM178BQ8IXR5 827 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 SYCP3Q8IZU3 236 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 GBP7Q8N8V2 638 aaPredicted RBP11.87□□□□□ -0.51
CCDC40-203ENST00000374877 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
CCDC40-203ENST00000374877 ART4Q93070 314 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 SPDL1Q96EA4 605 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 PARVGQ9HBI0 331 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 ASIC3Q9UHC3 531 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 PCDHA3Q9Y5H8 950 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 OAS1P00973 400 aaKnown RBP11.87□□□□□ -0.51
CCDC40-203ENST00000374877 BCRP11274 1271 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 LACTBP83111 547 aaPredicted RBP11.87□□□□□ -0.51
CCDC40-203ENST00000374877 BNIP1Q12981 228 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 SUPT20HL1Q3ZLR7 823 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 MFSD5Q6N075 450 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 SLC13A5Q86YT5 568 aaPredicted RBP11.87□□□□□ -0.51
CCDC40-203ENST00000374877 ZNF570Q96NI8 536 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 AGPAT3Q9NRZ7 376 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 TBK1Q9UHD2 729 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 ARL2BPQ9Y2Y0 163 aa11.87□□□□□ -0.51
CCDC40-203ENST00000374877 TBX3O15119 743 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 EIF3DO15371 548 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 NDUFB10O96000 172 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 DLATP10515 647 aaKnown RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 CCND1P24385 295 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 STX2P32856 288 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 GCKP35557 465 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 MSH2P43246 934 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 KIF22Q14807 665 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 TNFAIP8L3Q5GJ75 292 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 NBPF12Q5TAG4 269 aaPredicted RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 MOXD1Q6UVY6 613 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 FITM2Q8N6M3 262 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 C1orf54Q8WWF1 131 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 FAM20AQ96MK3 541 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 MKNK1Q9BUB5 465 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 ROPN1BQ9BZX4 212 aaPredicted RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 ROPN1Q9HAT0 212 aaPredicted RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 SOCS7O14512 581 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 BRAFP15056 766 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 ATP11AP98196 1134 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 TRIP13Q15645 432 aaPredicted RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 GALNTL6Q49A17 601 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 Q4G0T1 1027 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 LRCH2Q5VUJ6 765 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 NAIF1Q69YI7 327 aaPredicted RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 VSTM1Q6UX27 236 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 RNF207Q6ZRF8 634 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 TGS1Q96RS0 853 aaKnown RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 A0A1W2PRG0 241 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 GGPS1O95749 300 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 PEX5P50542 639 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 BFSP1Q12934 665 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 ODR4Q5SWX8 454 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 SEPT14Q6ZU15 432 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 TRMT10CQ7L0Y3 403 aaKnown RBP11.86□□□□□ -0.51
CCDC40-203ENST00000374877 CYFIP1Q7L576 1253 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 RMDN2Q96LZ7 410 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 VAV3Q9UKW4 847 aa11.86□□□□□ -0.51
CCDC40-203ENST00000374877 EIF4E1BA6NMX2 242 aaKnown RBP11.85□□□□□ -0.51
CCDC40-203ENST00000374877 PLA2G6O60733 806 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 ALAS1P13196 640 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 ALADP13716 330 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 ATP5DP30049 168 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 CHKAP35790 457 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 PEX19P40855 299 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 VPS41P49754 854 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 KRT17Q04695 432 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 NSMFQ6X4W1 530 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 ARHGEF19Q8IW93 802 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 DCPSQ96C86 337 aaKnown RBP11.85□□□□□ -0.51
CCDC40-203ENST00000374877 DYDC2Q96IM9 177 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 WNT8AQ9H1J5 351 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 PCIF1Q9H4Z3 704 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 IQCA1LA6NCM1 817 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 CLDN3O15551 220 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 BMP3P12645 472 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 KYNUQ16719 465 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 NOL9Q5SY16 702 aaKnown RBP11.85□□□□□ -0.51
CCDC40-203ENST00000374877 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 RPS6KC1Q96S38 1066 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 PAIP2Q9BPZ3 127 aaKnown RBP11.85□□□□□ -0.51
CCDC40-203ENST00000374877 POLR3CQ9BUI4 534 aaPredicted RBP11.85□□□□□ -0.51
CCDC40-203ENST00000374877 AMNQ9BXJ7 453 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 RXFP1Q9HBX9 757 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 ACP6Q9NPH0 428 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 EMSYQ7Z589 1322 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 DLG4P78352 724 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 SGO2Q562F6 1265 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 STXBP4Q6ZWJ1 553 aa11.85□□□□□ -0.51
CCDC40-203ENST00000374877 SCYL3Q8IZE3 742 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms