RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 KREMEN1Q96MU8 473 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 SCLT1Q96NL6 688 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 FNBP1Q96RU3 617 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 RAB20Q9NX57 234 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 GINS2Q9Y248 185 aa16.99■□□□□ 0.31
NIPAL3-204ENST00000374399 SSU72P8A0A1W2PR75 194 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 EIF3CLB5ME19 914 aaKnown RBP16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 FANCGO15287 622 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 ZSCAN12O43309 604 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 SERPING1P05155 500 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 TNNI1P19237 187 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 GRK4P32298 578 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 PRKCIP41743 596 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 PRMT2P55345 433 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 OSTNP61366 133 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 CETN1Q12798 172 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 SNX17Q15036 470 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 NME8Q8N427 588 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 SPAG5Q96R06 1193 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 EIF3CQ99613 913 aaKnown RBP16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■■■ 121.8
NIPAL3-204ENST00000374399 DAAM1Q9Y4D1 1078 aa16.98■□□□□ 0.31
NIPAL3-204ENST00000374399 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 RCCD1A6NED2 376 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 EIF4BP23588 611 aaKnown RBP16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 KIF11P52732 1056 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 HSP90AA2PQ14568 343 aaPredicted RBP16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 ASIC2Q16515 512 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 TAF2Q6P1X5 1199 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 SERINC5Q86VE9 423 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 EFCAB13Q8IY85 973 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 TATDN2Q93075 761 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 PI4K2AQ9BTU6 479 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 UBE2TQ9NPD8 197 aaPredicted RBP16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 TFR2Q9UP52 801 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 TRIM17Q9Y577 477 aa16.97■□□□□ 0.31
NIPAL3-204ENST00000374399 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 FOXN3O00409 490 aaPredicted RBP16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 CITO14578 2027 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 ERLIN2O94905 339 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 HLA-DRAP01903 254 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 STAG3L1P0CL83 205 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 CXCL8P10145 99 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 RFX1P22670 979 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 SOX5P35711 763 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 CYP27A1Q02318 531 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 ARID5AQ03989 594 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 PTK2Q05397 1052 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 ZNF571Q7Z3V5 609 aaPredicted RBP16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 WDR49Q8IV35 697 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 CCDC42Q96M95 316 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 SYT11Q9BT88 431 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 HAUS4Q9H6D7 363 aa16.96■□□□□ 0.31
NIPAL3-204ENST00000374399 CCP110O43303 1012 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 B4GALT4O60513 344 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 CYLC1P35663 651 aaPredicted RBP16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 STAT1P42224 750 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 ACLYP53396 1101 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 CRYBB1P53674 252 aaPredicted RBP16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 ARHGAP44Q17R89 818 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 TMEM132AQ24JP5 1023 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 SLC10A6Q3KNW5 377 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 TMEM130Q8N3G9 435 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 PCSK9Q8NBP7 692 aaKnown RBP16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 NENFQ9UMX5 172 aa16.96■□□□□ 0.3
NIPAL3-204ENST00000374399 EVI5O60447 810 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 GFPT2O94808 682 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 CST3P01034 146 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 CLTAP09496 248 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 TNNT1P13805 278 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 GFPT1Q06210 699 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 KLHL30Q0D2K2 578 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 ARHGEF6Q15052 776 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 PCBP1Q15365 356 aaKnown RBP eCLIP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 PTPN14Q15678 1187 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 CATSPER4Q7RTX7 472 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 RNF180Q86T96 592 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 RPAINQ86UA6 219 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 EIF2AQ9BY44 585 aaKnown RBP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 CELF4Q9BZC1 486 aaKnown RBP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 IRX2Q9BZI1 471 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 CXCL16Q9H2A7 254 aa16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 APOBEC3GQ9HC16 384 aaKnown RBP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 HMX1Q9NP08 348 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-204ENST00000374399 RALGAPA2Q2PPJ7 1873 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 LACTBL1A8MY62 500 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 CHRNA1P02708 482 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 MRPS6P82932 125 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 POU5F1Q01860 360 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 MGAT3Q09327 533 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 TDRD12Q587J7 1177 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 FAM47CQ5HY64 1035 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 SPOPLQ6IQ16 392 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 SHC3Q92529 594 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 OSBPL7Q9BZF2 842 aa16.94■□□□□ 0.3
NIPAL3-204ENST00000374399 MTMR12Q9C0I1 747 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms